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Fig. 3 | Cancer Cell International

Fig. 3

From: Genetic variants in the circadian rhythm pathway as indicators of prostate cancer progression

Fig. 3

Expression quantitative trait loci (eQTL) analyses targeting the NPAS2 locus with data of the HapMap CHB population. a eQTL SNPs are visualized as a regional plot (2 Mb), where a dotted line represents the P value threshold (0.01). b Best candidate eQTL SNPs after running 10,000 permutations. rho, Spearman’s rank correlation coefficient; P, P value; Pemp, adjusted P value after running 10,000 permutations. Note that NPAS2 is located between coordinates 100,803,039 and 100,979,719 according to the NCBI36/Ensembl 50 assembly

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