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Table 2 Gene ontology analysis of mRNAs associated with HER2-positive breast cancer

From: Development of a risk scoring system for evaluating the prognosis of patients with Her2-positive breast cancer

Category

Term

Count

P value

GOTERM_BP_DIRECT

GO:0007165 ~ signal transduction

61

0.028781941

GO:0045944 ~ positive regulation of transcription from RNA polymerase II promoter

55

0.012328036

GO:0051301 ~ cell division

43

2.54E−10

GO:0008284 ~ positive regulation of cell proliferation

43

9.78E−07

GO:0000122 ~ negative regulation of transcription from RNA polymerase II promoter

41

0.025358743

GOTERM_CC_DIRECT

GO:0070062 ~ extracellular exosome

168

2.12E−08

GO:0005576 ~ extracellular region

160

2.27E−28

GO:0005615 ~ extracellular space

147

3.61E−30

GO:0005578 ~ proteinaceous extracellular matrix

43

2.09E−14

GO:0031012 ~ extracellular matrix

39

1.74E−10

GOTERM_MF_DIRECT

GO:0005515 ~ protein binding

379

0.003363112

GO:0005509 ~ calcium ion binding

61

2.17E−08

GO:0042802 ~ identical protein binding

43

0.012433807

GO:0042803 ~ protein homodimerization activity

42

0.01295918

GO:0046982 ~ protein heterodimerization activity

35

3.60E−04

  1. aIf there were more than five terms enriched in this category, top five terms were selected according to count value