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Table 1 Sequences of primers used in qRT-PCR and of plasmids applied in cell transfection

From: Long non-coding RNA LINC01419 mediates miR-519a-3p/PDRG1 axis to promote cell progression in osteosarcoma

Genes

Sequences of primers (5′–3′)

LINC01419

F: AGAACTGAGGTCCACTTTCTGG

R: GGTCCTTTGTCTGCAACGA

miR-519a-3p

F: AAAGTGCATCCTTTTAGAGTGTGG

R: CTCTACAGCTATATTGCCAGCCAC

miR-519c-3p

F: AAAGTGCATCTTTTTAGAGGATCG

R: CTCTACAGCTATATTGCCAGCCAC

miR-519b-3p

F: AAAGTGCATCCTTTTAGAGGTTCC

R: CTCTACAGCTATATTGCCAGCCAC

miR-3121-3p

F: TAAATAGAGTAGGCAAAGGACAGCC

R: CTCTACAGCTATATTGCCAGCCAC

PDRG1

F: TGAGCCACAAAGCACCAA

R: TCACATGGACCCTGAGCA

GAPDH

F: CATCCTGGGCTACACTGAGC

R: AGTGGTCGTTGAGGGCAA

U6

F: AAAGCAAATCATCGGACGACC

R: GTACAACACATTGTTTCCTCGGA

shRNAs/pcDNA3.1

Sequences (5′-3′)

 sh-NC

CCGGCACTAATGTCTGCGTCAATGTCTCGAGACATTGACGCAGACATTAGTGTTTTTG

 sh-LINC01419#1

CCGGTGCATAGATTCATTAAGAATTCTCGAGAATTCTTAATGAATCTATGCATTTTTG

 sh-LINC01419#2

CCGGATCTATGAAGCCAAACCTAATCTCGAGATTAGGTTTGGCTTCATAGATTTTTTG

 sh-NC

CCGGGTGACATAGTGCACAGTTGGACTCGAGTCCAACTGTGCACTATGTCACTTTTTG

 sh-PDRG1#1

CCGGCACCAAGATTCTGTTCTTCATCTCGAGATGAAGAACAGAATCTTGGTGTTTTTG

 sh-PDRG1#2

CCGGACCAAGATTCTGTTCTTCATTCTCGAGAATGAAGAACAGAATCTTGGTTTTTTG

 pcDNA3.1-P DRG1

ATGCTATCACCCGAGGCAGAGCGAGTGCTGCGGTACCTTGTAGAAGTGGAGGAGCTCGCCGAGGAGGTGCTGGCGGACAAGCGGCAGATTGTGGACCTGGACACTAAAAGGAATCAGAATCGAGAGGGCCTGAGGGCCCTGCAGAAGGATCTCAGCCTCTCTGAAGATGTGATGGTTTGCTTCGGGAACATGTTTATCAAGATGCCTCACCCTGAGACAAAGGAAATGATTGAAAAAGATCAAGATCATCTGGATAAAGAAATAGAAAAACTGCGGAAGCAACTTAAAGTGAAGGTCAACCGCCTTTTTGAGGCCCAAGGCAAACCGGAGCTGAAGGGTTTTAACTTGAACCCCCTCAACCAGGATGAGCTTAAAGCTCTCAAGGTCATCTTGAAAGGA

Mimics/inhibitor

 NC mimics

AUUCACGUUCCUUUUAGAGUGU

 miR-519a-3p mimics

AAAGUGCAUCCUUUUAGAGUGU

 NC inhibitor

ACACUCUAAAAGGAACGUGAAU

 miR-519a-3p inhibitor

ACACUCUAAAAGGAUGCACUUU