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Table 4 Summary of differential metabolites between OS and OS-IC50

From: Untargeted LC–MS/MS analysis reveals metabolomics feature of osteosarcoma stem cell response to methotrexate

 

Metabolite

143B

MG63

VIP

P value

FC

VIP

P value

FC

Amino acids

Lysyl-Glycine

1.83

1.56 × 10−04

0.14

2.37

4.07 × 10−04

0.67

Prolyl-Valine

1.72

1.35 × 10−07

0.13

1.88

1.85 × 10−05

0.67

Alanyl-Isoleucine

1.48

1.03 × 10−09

0.05

1.25

1.42 × 10−05

0.83

l-Proline

1.11

3.07 × 10−04

0.09

2.17

5.75 × 10−04

0.36

L-prolyl-l-phenylalanine

1.58

1.73 × 10−04

0.25

1.85

1.52 × 10−03

0.82

Histidinyl-Methionine

1.53

1.37 × 10−07

0.16

4.03

6.46 × 10−07

0.17

Phenylalanyl-Alanine

5.82

5.70 × 10−09

0.04

8.22

2.12 × 10−08

0.68

Isoleucyl-Tyrosine

2.46

1.04 × 10−05

0.12

3.29

3.24 × 10−06

0.59

Phenylalanyl-Glutamate

1.68

8.19 × 10−07

0.14

2.07

6.45 × 10−06

0.59

Ornithine

1.10

8.96 × 10−06

0.05

1.51

1.09 × 10−09

0.48

Valyl-Tryptophan

1.77

7.45 × 10−10

0.09

3.47

2.38 × 10−09

0.37

NAAG

1.27

2.53 × 10−10

6.58

1.37

1.11 × 10−04

2.12

Alpha-N-Phenylacetyl-l-glutamine

1.59

7.87 × 10−08

0.03

2.01

5.01 × 10−06

0.43

N-(omega)-Hydroxyarginine

1.03

4.98 × 10−04

0.21

1.15

2.16 × 10−03

0.44

gamma-L-Glutamyl-l-phenylalanine

1.22

1.12 × 10−08

0.18

1.13

3.80 × 10−07

0.62

S-Adenosyl-L-homocysteine

2.33

1.61 × 10−06

3.20

1.22

4.99 × 10−05

6.00

Phenylalanyl-Tryptophan

1.35

5.22 × 10−08

0.14

1.51

1.87 × 10−06

0.67

Valyl-Methionine

1.33

4.65 × 10−08

0.10

1.37

2.91 × 10−03

0.61

Leucyl-Glutamine

1.56

8.20 × 10−08

0.05

2.15

3.86 × 10−08

0.24

L-Malic acid

2.49

1.79 × 10−08

3.36

1.56

3.83 × 10−08

1.38

Citrate

4.62

1.53 × 10−10

3.11

2.12

1.07 × 10−06

1.37

Glutathione

5.65

2.45 × 10−06

1.51

5.55

1.29 × 10−06

2.62

Tyrosyl-Serine

1.26

7.82 × 10−06

0.10

1.72

6.27 × 10−08

0.53

Methionyl-Tyrosine

1.22

2.91 × 10−07

0.10

1.33

2.37 × 10−06

0.60

Phenylalanylphenylalanine

2.84

7.23 × 10−09

0.09

3.66

3.80 × 10−08

0.64

Isoleucyl-Tryptophan

1.85

7.53 × 10−06

0.14

3.56

1.89 × 10−05

0.42

Phenylalanyl-Tyrosine

1.94

7.19 × 10−06

0.21

1.96

2.50 × 10−02

0.65

7,8-Dihydrobiopterin

1.41

2.99 × 10−06

0.05

2.74

1.58 × 10−08

0.41

Fatty acids

Desmosterol

2.62

1.23 × 10−06

0.21

1.25

1.99 × 10−03

0.79

7-Ketocholesterol

1.18

1.61 × 10−03

1.72

1.33

1.87 × 10−05

2.53

Undecanedioic acid

1.06

4.26 × 10−05

0.27

1.18

5.06 × 10−05

0.69

Erucamide

11.91

1.43 × 10−06

2.93

4.20

1.68 × 10−06

1.31

Linoleic acid

1.47

2.22 × 10−02

1.35

3.37

3.04 × 10−04

5.31

LysoPC(O-18:0)

3.37

5.08 × 10−04

1.66

4.57

5.32 × 10−11

2.21

Oleic acid

1.41

4.01 × 10−04

0.74

1.86

3.45 × 10−04

0.75

Arachidonic Acid (peroxide free)

1.25

4.31 × 10−04

0.78

3.66

1.96 × 10−08

0.41

LysoPC(18:1(9Z))

2.90

8.94 × 10−06

0.48

1.92

1.24 × 10−04

0.63

LysoPE(16:0/0:0)

3.53

1.59 × 10−08

1.59

6.35

1.11 × 10−04

2.00

PE(16:0/18:1(9Z))

1.22

2.94 × 10−07

2.67

2.34

1.11 × 10−09

3.97

PC(16:0/16:0)

4.22

1.30 × 10−10

4.99

4.18

2.97 × 10−10

3.98

PS(18:0/18:1(9Z))

1.02

2.56 × 10−07

2.43

2.14

2.18 × 10−08

3.83

PC(18:1(9Z)/18:1(9Z))

11.58

2.25 × 10−08

4.08

6.54

5.93 × 10−07

6.44

SOPC

3.69

4.05 × 10−09

3.37

3.01

4.32 × 10−09

3.45

Energy

ADP

4.79

4.17 × 10−06

1.94

3.10

6.91 × 10−07

1.63

GDP

1.41

1.24 × 10−05

0.72

1.41

1.24 × 10−05

0.72

GTP

2.21

4.37 × 10−03

2.03

2.04

5.37 × 10−04

3.14

Nucleic acid

2′-O-methylcytidine

2.70

2.18 × 10−10

0.32

1.75

2.30 × 10−07

0.51

CTP

1.50

8.34 × 10−05

1.56

2.08

3.40 × 10−06

1.65

UTP

2.08

6.54 × 10−04

2.86

2.30

5.85 × 10−04

5.88

dGTP

10.36

1.05 × 10−05

2.57

12.58

6.78 × 10−08

6.97

Uridine

1.11

6.61 × 10−07

0.23

2.19

4.02 × 10−09

0.18

Inosine

1.72

3.86 × 10−09

0.24

5.84

1.41 × 10−07

0.27

Thymidine

2.05

2.01 × 10−12

0.12

4.59

3.33 × 10−12

0.13

Adenosine 3′-monophosphate

2.50

3.86 × 10−08

1.79

2.33

2.24 × 10−07

3.34

UDP

1.49

8.75 × 10−04

0.44

1.28

7.28 × 10−05

0.63

UDP-D-Galactose

4.91

2.72 × 10−06

0.33

1.62

2.33 × 10−06

0.62

  1. VIP Variable Importance for the Project, FC fold change, NAAG N-Acetylaspartylglutamate, SOPC 1-Stearoyl-2-oleoyl-sn-glycerol 3-phosphocholine, ADP adenosine 5′-diphosphate, GDP Guanosine 5′-diphosphate, GTP Guanosine 5′-triphosphate, CTP Cytidine triphosphate, UTP Uridine 5′-triphosphate, dGTP Deoxyguanosine triphosphate, UDP Uridine 5′-diphosphate