Table 4 Top each ten up- and down-regulated lncRNAs and corresponding gene information of lncRNAs
From: Characterization and validation of long noncoding RNAs as new candidates in prostate cancer
Accession | P-values | Fold change | Regulation | Chromosome | Strand | Gene symbol | Associated gene description | |
|---|---|---|---|---|---|---|---|---|
NR_125857 | 0.0012796 | 59.276583 | up | chr6 |  +  | EVADR | − | |
NR_015342 | 0.003856 | 28.092424 | up | chr9 |  +  | PCA3 | prune homolog 2 (Drosophila) | |
NR_109832 | 0.0087905 | 21.726513 | up | chr22 |  +  | PCAT14 | − | |
ENST00000412654 | 0.0026089 | 19.731117 | up | chr9 |  +  | PCA3 | prune homolog 2 (Drosophila) | |
lnc-AC110080.1–5:1 | 0.0214716 | 17.480829 | up | chr2 | − | –− | − | |
ENST00000415820 | 0.0175281 | 16.656541 | up | chr21 | − | AP001610.9 | − | |
ENST00000558010 | 0.0150573 | 15.600412 | up | chr15 | − | RP11-279F6.2 | − | |
ENST00000365110 | 0.0289324 | 13.988218 | up | chr11 |  +  | SNORA62 | − | |
NONHSAT072254 | 0.0075766 | 12.035524 | up | chr2 | − | –− | − | |
NONHSAT072236 | 0.0072588 | 11.671845 | up | chr2 | − | –− | − | |
ENST00000623273 | 0.0117887 | 0.2264097 | down | chr5 | − | CTB-174D11.3 | slit homolog 3 (Drosophila) | |
ENST00000424251 | 0.0143991 | 0.2204195 | down | chrX |  +  | RP1-146A15.1 | interleukin 1 receptor accessory protein-like 1 | |
lnc-TACC2-3:1 | 0.0146426 | 0.2146128 | down | chr10 |  +  | –− | transforming, acidic coiled-coil containing protein 2 | |
NR_125859 | 0.0322068 | 0.2054874 | down | chr6 |  +  | LOC101928540 | filamin A interacting protein 1 | |
NONHSAT136589 | 0.0022274 | 0.1790319 | down | chrX | − | –− | dystrophin | |
lnc-CHST2-2:3 | 0.023774 | 0.1771025 | down | chr3 |  +  | –− | − | |
lnc-PDCD11-5:1 | 0.000183 | 0.1635704 | down | chr10 |  +  | –− | neuralized E3 ubiquitin protein ligase 1 | |
lnc-PTEN-11:1 | 0.0032078 | 0.1472261 | down | chr10 |  +  | –− | - | |
lnc-MID1-4:1 | 0.00866 | 0.1373993 | down | chrX | − | –− | Rho GTPase activating protein 6 | |
lnc-C19orf73-1:1 | 0.034911 | 0.030913 | down | chr19 | − | –− | histidine rich calcium binding protein | |
lnc-MYL2-4:1 | 0.0190929 | 0.0014053 | down | chr12 | − | –− | myosin, light chain 2, regulatory, cardiac, slow | |