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Table 2 31-CpG-sites details in the epigenetic signature

From: Epigenetic signature predicts overall survival clear cell renal cell carcinoma

CpG ID Gene symbol CHR Strand Type Feature Delta β Lasso coef
cg00936626 PIGZ 3 F II 5′UTR − 0.20 0.96
cg01569664 IRS2 13 R I Body − 0.20 0.2
cg03429569   2 R II IGR − 0.22 − 0.31
cg03615683   12 R II IGR − 0.21 0.62
cg04025970 MFHAS1 8 R II Body − 0.23 0.12
cg04074945 PHF21A 11 F II Body − 0.26 − 0.06
cg07522913 HOXA3 7 F I 5′UTR − 0.27 − 0.25
cg07915516 AXIN1 16 R II Body 0.22 0.67
cg08699206   4 R I IGR − 0.34 0.93
cg08949329 COL4A2 13 R II Body − 0.22 0.6
cg09507567   10 R II IGR 0.24 0.06
cg09744051 A4GALT 22 F II 5′UTR 0.25 0.59
cg10057940   10 F II IGR − 0.24 0.57
cg10621809   12 R II IGR − 0.24 0.47
cg12304520 PCDHGA4 5 R II Body − 0.22 0.7
cg12864389 PLEC1 8 F II Body 0.37 − 1.15
cg14476745 LHX6 9 R I Body − 0.31 0.1
cg15022051   6 R I IGR − 0.25 0.48
cg15518113 CD247 1 R II 3′UTR − 0.22 1.09
cg16059943 PRKCZ 1 F II Body − 0.23 − 1.38
cg16342949 MACROD1 11 F I Body − 0.24 0.38
cg16723800 TAF7L X F I Body − 0.31 0.04
cg17482089 PCDHA6 5 R I Body − 0.24 0.73
cg18954144   2 R I IGR − 0.30 0.43
cg19476788 NFATC1 18 R I Body − 0.26 0.08
cg19528338 BMP2 20 R II 5′UTR 0.21 0.6
cg21033440 SIPA1 11 F I Body − 0.26 0.65
cg21157873 CGN 1 R II 5′UTR − 0.26 0.03
cg24997744 BAHCC1 17 R I 3′UTR − 0.22 − 1.27
cg25541653 MPPED2 11 R II Body − 0.25 − 1.29
cg25755851   1 F II IGR 0.41 − 0.13