From: Cancer-related circular RNA: diverse biological functions
Database | Websites | The date of launching | Function |
---|---|---|---|
circRNABase | 2013 | Constructing interaction networks of miRNA and circRNA and circRNA and RBPs | |
Circ2Traits | 2013 | The first database to collect circRNAs potentially associated with human disease or traits | |
circBase | 2014 | Information such as genome location, cell line or tissue source and references can be provided and downloaded for a specific circRNA | |
CIRCpedia | 2016 | Providing annotations of alternative splicing and back splicing events for circRNAs from different cell lines or tissues | |
deepBase v2.0 | 2016 | A platform for analyzing and predicting the evolution, expression patterns and functions of ncRNA in 19 different species | |
CircInteractome | 2016 | Predicting potential binding sites for RBPs and circRNA, miRNAs and circRNA, designing primers and siRNA for circRNAs | |
CircNet | 2016 | The first public information platform that provides tissue-specific circRNA expression and circRNA-miRNA-mRNA regulatory networks | |
CircRNADb | 2016 | The first circRNA database with the ability to encode proteins, providing information on the translational potential of circRNA and its related proteins | |
TSCD | 2017 | Searching for tissue-specific circRNA information in humans and mouse and predicting bound miRNAs | |
exoRBase | 2017 | Containing mRNA, lncRNA and circRNA, from serum exosomal RNA-seq sequencing samples | |
CSCD | 2018 | Provides many tumor-specific circRNAs, predicting MRE, RBP binding sites, ORF, and analyzing alternative splicing of related genes | |
circlncRNAnet | 2018 | An online analysis database that integrates the functional network of lncRNA and circRNA, supporting online visual analysis | |
circRNA disease | 2018 | Collecting human disease-related circRNAs and searching by circRNA name or disease name is supported | |
CircR2Disease | 2018 | Revealing the relationship between circRNA and disease, and building an interaction network of circRNA and diseases |