Fig. 2

Performance of CIBERSORT across immune cells. a The mean proportion of 22 immune cells in the Target dataset. b Correlation analysis between high/low immune scores and percentage of 22 immune cells is summarized in the heatmap. c Violin plot of high immune score and low immune score groups for the Target cohort, red for high immune score group and blue for low immune score group. The p values showed different infiltration types of immune cells by Wilcox test. d Correlation matrix of 21 immune cell proportions and immune/stromal score in the Target datasets. Variables have been ordered by average linkage clustering. For comparison, immune/stromal score has been rescaled to range between zero and one separately in each study