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Table 1 Summary of sequencing data and reads alignment statistics from MeRIP-seq and RNA-seq of IMPA tumors and corresponding normal tissues

From: Comprehensive analysis of the transcriptome‐wide m6A methylome in invasive malignant pleomorphic adenoma

Sample_ID Raw_Reads Raw_Bases Valid_Reads Valid_Bases Valid% Q30% GC%
N_1_input 37,981,486 5.70G 36,680,474 4.25G 74.54 92.56 60.10
N_1_IP 42,442,892 6.37G 40,978,956 4.71G 73.99 92.75 56.38
N_2_input 46,504,552 6.98G 44,899,032 5.11G 73.23 93.46 61.22
N_2_IP 43,737,914 6.56G 41,800,672 5.29G 80.63 92.84 42.40
N_3_input 52,307,560 7.85G 51,282,842 7.01G 89.28 93.05 49.66
N_3_IP 54,502,114 8.18G 52,615,686 7.31G 89.45 92.87 51.81
N_4_input 52,283,724 7.84G 50,587,688 6.84G 87.25 92.23 51.54
N_4_IP 53,657,420 8.05G 52,397,276 7.26G 90.15 91.86 53.12
N_5_input 47,355,842 7.10G 46,405,300 6.36G 89.52 93.67 48.27
N_5_IP 45,001,614 6.75G 44,176,592 6.17G 91.38 93.67 50.94
T_1_input 37,010,304 5.55G 35,760,348 4.32G 77.79 93.35 51.39
T_1_IP 42,144,148 6.32G 41,469,572 5.06G 80.01 94.84 48.96
T_2_input 38,337,450 5.75G 37,256,256 4.56G 79.30 93.73 53.78
T_2_IP 43,666,036 6.55G 42,549,088 5.26G 80.26 94.29 50.59
T_3_input 47,030,148 7.05G 45,993,690 6.31G 89.41 93.59 49.06
T_3_IP 48,856,372 7.33G 47,336,610 6.61G 90.18 93.44 50.77
T_4_input 47,752,230 7.16G 46,666,654 6.37G 88.96 93.78 48.72
T_4_IP 50,768,676 7.62G 49,769,428 6.96G 91.33 93.60 50.39
T_5_input 52,662,714 7.90G 51,546,390 7.07G 89.55 93.77 49.49
T_5_IP 50,883,836 7.63G 48,867,432 6.83G 89.43 93.66 51.21
  1. N represents the IMPA normal tissues, while T represents the IMPA tumor tissues. Q30 % reflects the percentage of bases with a quality value ≥ 30 (sequencing error rate less than 0.001)