Description | Gene markers | LUAD | |||
---|---|---|---|---|---|
None | Purity | ||||
Cor | P | Cor | P | ||
CD8+ T cell | CD8A | 0.031 | 4.87e−01 | 0.037 | 4.18e−01 |
 | CD8B | 0.064 | 1.46e−01 | 0.064 | 1.53e−01 |
T cell (general) | CD2 | − 0.122 | 5.43e−03 | − 0.131 | 3.47e−03 |
 | CD3E | − 0.16 | 2.61e−04 | − 0.178 | 6.96e−05 |
B cell | CD19 | − 0.218 | 5.77e−07 | − 0.247 | 2.88e−08 |
 | CD79A | − 0.202 | 4.24e−06 | − 0.221 | 7.46e−07 |
Natural killer cell | KIR2DL1 | − 0.016 | 7.21e−01 | − 0.024 | 5.88e−01 |
 | KIR2DL3 | 0.13 | 3.16e−03 | 0.144 | 1.37e−03 |
 | KIR2DL4 | 0.301 | 2.85e−12 | 0.312 | 1.39e−12 |
 | KIR3DL1 | 0.06 | 1.75e−01 | 0.065 | 1.51e−01 |
 | KIR3DL2 | 0.048 | 2.82e−01 | 0.067 | 1.38e−01 |
 | KIR3DL3 | 0.102 | 2e−02 | 0.112 | 1.29e−02 |
 | CD56 | − 0.199 | 5.47e−06 | − 0.205 | 4.40e−06 |
Neutrophils | CD66b | − 0.297 | 5.67e−12 | − 0.298 | 1.53e−11 |
 | CD11b | − 0.075 | 8.78e−02 | − 0.06 | 1.87e−01 |
 | CCR7 | − 0.265 | 1.21e−09 | − 0.291 | 4.62e−11 |
Th1 | T-bet | − 0.071 | 1.06e−01 | − 0.079 | 7.84e−02 |
 | STAT4 | 0.225 | 4.85e−02 | 0.173 | 1.44e−01 |
 | TNF | 0.243 | 3.08e−02 | 0.177 | 1.35e−01 |
Th2 | GATA3 | 0.125 | 2.74e−01 | 0.168 | 1.56e−01 |
 | STAT6 | 0.224 | 4.72e−02 | 0.22 | 6.16e−02 |
 | STAT5A | 0.259 | 2.17e−02 | 0.204 | 8.30e−02 |
 | IL13 | 0.046 | 6.84e−01 | 0.134 | 2.58e−01 |
Tfh | BCL6 | 0.194 | 8.61e−02 | 0.246 | 3.61e−02 |
Th17 | STAT3 | 0.293 | 8.93e−03 | 0.289 | 1.32e−02 |
 | IL17A | 0.199 | 7.89e−02 | 0.185 | 1.18e−01 |
T cell exhaustion | LAG3 | 0.067 | 5.55e−01 | 0.016 | 8.91e−01 |
 | CTLA4 | 0.094 | 4.11e−01 | 0.028 | 8.16e−01 |
 | TIM-3 | 0.185 | 1.02e−01 | 0.132 | 2.66e−01 |
Mast cells | TPSB2 | 0.051 | 6.58e−01 | 0.045 | 7.08e−01 |
 | TPSAB1 | 0.031 | 7.84e−01 | 0.005 | 9.68e−01 |
 | CPA3 | 0.142 | 2.13e−01 | 0.14 | 2.38e−01 |
 | MS4A2 | 0.192 | 9.04e−02 | 0.176 | 1.35e−01 |
 | HDC | 0.062 | 5.87e−01 | − 0.029 | 8.09e−01 |