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Table 1 Identities of circRNAs in the prognostic signature and univariable cox association with prognosis

From: RNA sequencing reveals the expression profiles of circRNA and identifies a four-circRNA signature acts as a prognostic marker in esophageal squamous cell carcinoma

Database ID

Parent gene

Coefficient

P

Expression with poor prognosis

Chromosome

circRNA type

FISH Probe

hsa_circ_0008199

ATXN10

− 1.181

0.001

Low

chr22:46085591-46136418

Exon

CTGGGTGCTGTTTCTCTTGTCTTGGT

hsa_circ_0007541

USP13

0.742

0.024

High

chr3:179481789-179483636

Intron

CGGCTCAGCAAAATTTCCAGATCCAT

hsa_circ_0000005

CDK11A

0.916

0.004

High

chr1:1586822-1650894

Exon

CATCTTCTTCTCCTCTGTCTTCCATA

hsa_circ_0077536

ATG5

1.065

0.001

High

chr6:106727535-106756366

Exon

CTTGGCAAAAGCAACATTTTGCAATC

  1. FISH: RNA Fluorescence in situ hybridization