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Fig. 1 | Cancer Cell International

Fig. 1

From: Identification of collagen genes related to immune infiltration and epithelial-mesenchymal transition in glioma

Fig. 1

Identification of co-expression gene modules of glioma by WGCNA. A Volcano plots showing the DEGs between glioma samples and non-tumor samples. Red dots indicate up-regulated genes, while green dots down-regulated genes. B Cluster dendrogram of different gene modules. Genes were clustered into a module of high interconnection and marked by different colors in the horizontal bar (grey represented unassigned genes). C Network heatmap plot. Each column and row represent genes, low topological overlap showed light colors and higher topological overlap showed darker colors. D Relationships between modules and clinical traits. Each column corresponds to a clinical trait, and the row corresponds to a module eigengene. Each unit includes the corresponding correlation coefficient and p-value in the first and second lines respectively. EF indicate that the yellow module significantly correlated with glioma WHO-grade and survival time. Each dot represents a unique gene within the module, which was plotted by MM on the x-axis and GS on the y-axis. Besides, the correlation value and p-value were displayed

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