Gene groups | Gene names | Primer Sequence (5´ → 3´) |
---|---|---|
Selected genes from bioinformatics analysis | DDIT4 | F: CTTTGGGACCGCTTCTCGTC R: GGTAAGCCGTGTCTTCCTCCG |
SULF1 | F: GGACGGATACAGCAGGAACG R: CAGCACATGGGTGTAGTCACA | |
TPTEP1 | F: AGCCGCAGACAAAAGACCTCGG R: CCACCAAACAGGCTTCGTGTGA | |
miRNA-181d-5p | AACATTCATTGTTGTCGGTGGGT | |
miRNA-148b-3p | TCAGTGCATCACAGAACTTTGT | |
Stemness genes | OCT4 | F: GTGGAGAGCAACTCCGATG R: TGCAGAGCTTTGATGTCCTG |
SOX2 | F: AATGGGAGGGGTGCAAAAGAGG R: GTGAGTGTGGATGGGATTGGTG | |
C-MYC | F: ACACATCAGCACAACTACG R: CGCCTCTTGACATTCTCC | |
KLF4 | F: CCTCGCCTTACACATGAAGAG R: CATCGGGAAGACAGTGTGAAA | |
NANOG | F: AGCTACAAACAGGTGAAGAC R: GGTGGTAGGAAGAGTAAAGG | |
EMT genes | TWIST1 | F: TTCTCGGTCTGGAGGATGGAG R: ACGCCCTGTTTCTTTGAATTTGG |
SNAIL1 | F: CCAGAGTTTACCTTCCAGCA R: GATGAGCATTGGCAGCGA | |
VIM | F: TCTACGAGGAGGAGATGCGG R: GGTCAAGACGTGCCAGAGAC | |
ZEB1 | F: CTTCTCACACTCTGGGTCTTATTC R: CGTTCTTCCGCTTCTCTCTTAC | |
ABC transporter genes | ABCB1 | F: GTTCAGGTGGCTCTGGATAAG R: AGCGATGACGTCAGCATTAC |
ABCG2 | F: TTCCACGATATGGATTTACGG R: GTTTCCTGTTGCATTGAGTCC | |
ABCC1 | F: CGCCTTCGCTGAGTTCCT R: TGCGGTGCTGTTGTGGTG | |
Housekeeping genes | GAPDH | F: CATGAGAAGTATGACAACAGCCT R: AGTCCTTCCACGATACCAAAGT |
RNU6 (U6) | F: TCGCTTCGGCAGCACATATAC R: GCGTGTCATCCTTGAGCAG |