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Table 4 The correlation of CD58 with immune-related, EMT-related, CSC-related markers

From: Upregulated CD58 is associated with clinicopathological characteristics and poor prognosis of patients with pancreatic ductal adenocarcinoma

Types

Markers

TIMER

GEPIA

R

p-value

R

p-value

Immune cell

CD45 (PTPRC)

0.050

0.510

0.037

0.620

T cell (general)

CD3D

− 0.008

0.911

− 0.026

0.730

 

CD3E

− 0.002

0.982

− 0.013

0.860

 

CD3G

0.027

0.721

− 0.028

0.710

CD4+ T cell

CD4

0.088

0.242

0.075

0.320

 

FOXP3

0.057

0.451

0.066

0.380

CD8+ T cell

CD8A

− 0.001

0.986

− 0.200

0.790

 

CD8B

0.019

0.799

0.009

0.910

B cell

CD19

0.030

0.695

0.022

0.770

 

CD79A

− 0.018

0.814

− 0.046

0.540

Monocyte

CD86

0.158

*

0.150

*

 

CD115 (CSF1R)

0.043

0.568

0.053

0.480

Neutrophil

CD66b (CEACAM8)

0.182

*

0.190

*

 

CD11b (ITGAM)

0.255

***

0.240

**

 

CCR7

0.013

0.860

− 0.003

0.97

TAM

CD68

0.288

***

0.290

***

 

CCL2

− 0.053

0.477

− 0.051

0.500

M1 Macrophage

iNOS (NOS2)

0.086

0.249

0.110

0.130

 

HLA-DRB1

0.067

0.375

0.089

0.230

M2 Macrophage

CD163

0.088

0.243

0.110

0.140

 

CD204 (MSR1)

0.138

0.067

0.140

0.057

 

CD206 (MRC1)

0.066

0.382

0.058

0.440

NK cell

CD56 (NCAM1)

− 0.353

***

− 0.230

**

 

KIR2DL1

− 0.043

0.564

− 0.050

0.510

 

KIR3DL1

− 0.106

0.158

− 0.130

0.081

 

KIR2DS4

0.036

0.633

0.027

0.720

DC

S100A1

− 0.148

*

− 0.160

*

 

S100B

− 0.030

0.686

− 0.028

0.710

EMT-related

Vimentin (VIM)

0.196

**

0.210

**

 

E-Cadherin (CDH1)

0.506

***

0.540

***

 

Twist (TWIST1)

0.313

***

0.320

***

 

Snail (SNAI1)

0.157

*

0.170

*

 

N-Cadherin (CDH2)

0.032

0.670

0.051

0.500

CSC-related

CD133 (PROM1)

0.334

***

0.350

***

 

OCT4 (POU5F1)

0.407

***

0.420

***

 

KLF4

0.377

***

0.400

***

 

NANOG

0.060

0.428

0.170

*

 

CD24

0.149

*

0.140

0.059

 

ALDH1A1

− 0.044

0.560

− 0.047

0.530

 

SOX2

− 0.032

0.673

− 0.021

0.780

  1. N = 178
  2. R Spearman’s rho value, TAM tumor-associated macrophage, NK cell natural killer cell, EMT epithelial–mesenchymal transition, CSC cancer stem cell
  3. *p < 0.05, **p < 0.01, ***p < 0.001