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Table 3 Gene sets enriched in phenotype high

From: LRRK2 is a candidate prognostic biomarker for clear cell renal cell carcinoma

MSigDB collection Gene set name NES NOM p-val FDR q-val
c2.cp.kegg.v7.1.symbols.gmt Prostate cancer 2.16 0.006 0.093
MTOR signaling pathway 2.12 0.000 0.068
RIG-I-like receptor signaling pathway 2.11 0.002 0.047
ERBB signaling pathway 2.10 0.002 0.030
JAK-STATE signaling pathway 2.06 0.002 0.031
Apoptosis 1.99 0.011 0.032
  1. MSigDB molecular signatures database, NES Normalized Enrichment Score, FDR false discovery rate