Iron-sulphur cluster biogenesis factor LYRM4 is a novel prognostic biomarker associated with immune infiltrates in hepatocellular carcinoma

Table 4 Kinase, miRNA and transcription factor-target networks of LYRM4 in LIHC (LinkedOmics)

Enriched category	Geneset	Leading edge number	FDR	P value
Kinase Target	Kinase_MYLK	4	0.11981	0.0045662
	Kinase_MYLK3	4	0.11981	0.0045662
	Kinase_MYLK4	4	0.11981	0.0045662
	Kinase_RPS6KA4	7	0.13792	0.020492
	Kinase_EGFR	26	0.19472	0
miRNA Target	GTTTGTT,MIR-495	97	0	0
	GCACCTT,MIR-18A,MIR-18B	44	0	0
	CTATGCA,MIR-153	92	0	0
	AGCACTT,MIR-93,MIR-302A,MIR-302B,MIR-302C,MIR-302D,MIR-372,MIR-373,MIR-520E,MIR-520A,MIR-526B,MIR-520B,MIR-520C,MIR-520D	160	0	0
	ACATTCC,MIR-1,MIR-206	123	0	0
Transcription Factor Target	GGAANCGGAANY_UNKNOWN	44	0	0
	SCGGAAGY_V$ELK1_02	300	0	0
	V$ISRE_01	78	0.0011582	0
	V$PAX4_02	67	0.0017373	0
	YNGTTNNNATT_UNKNOWN	108	0.0034745	0

FDR, false discovery rate of gene set enrichment analysis (GSEA) from Benjamini and Hochberg. V$, the annotation found in Molecular Signatures Database (MSigDB) for transcription factors (TF)

ISSN: 1475-2867