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Fig. 2 | Cancer Cell International

Fig. 2

From: Spatial maps of hepatocellular carcinoma transcriptomes highlight an unexplored landscape of heterogeneity and a novel gene signature for survival

Fig. 2

Spatial gene expression heterogeneity within the case 1 tissue sample. A Tissue plot with spots coloured by UMI count and t-SNE projection of spots coloured by UMI counts. B Tissue plot with spots coloured by clustering and t-SNE projection of spots coloured by clustering. C Sequencing saturation and median genes per spot. D Violin plots displaying the expression of the top 100 DEGs in the 4 main clusters. E Spearman correlation between tumour area versus peritumour area. F Heatmap showing the expression levels of specific markers in 4 clusters

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Cancer Cell International

ISSN: 1475-2867

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