Table 2 CO and RE cancer cell surface biomarkers based on integrated MCIA and recount2
log2FoldChange | pvalue | padj | receptor ID | Gene ID |
|---|---|---|---|---|
Colon cancer: recount2 analysis filtered by MCIA hits | Â | |||
 0.659 | 6.844e−10 | 3.064e−9 | CD49f | ITGA6 |
 0.503 | 1.923e−06 | 6.064e−06 | CD15 | FUT4 |
 0.328 | 0.016 | 0.029 | CD104 | ITGB4 |
 − 0.431 | 3.118e−06 | 9.609e−06 | CD326 | EPCAM |
 − 0.489 | 2.994e−8 | 1.144e−7 | CD324 | CDH1 |
Renal cancer: recount2 analysis filtered by MCIA hits | Â | |||
 2.304 | 1.021e−36 | 1.237e−35 | TIM1 | HAVCR1 |
 1.726 | 4.503e−36 | 5.309e−35 | CD106 | VCAM1 |
 1.464 | 7.690e−63 | 2.500e−61 | SSEA-4 | TMCC1 |
 1.371 | 6.499e−11 | 2.119e−10 | SSEA-3 | B3GALT5 |
 1.200 | 1.296e−32 | 1.323e−31 | EGFR | EGFR |
 0.681 | 9.772e−7 | 2.383e−06 | CD26 | DPP4 |
 0.464 | 1.575e−8 | 4.375−8 | CD24 | CD24 |
 − 1.856 | 7.622e−41 | 1.1002e−39 | TRA-1-60-R | PODXL |