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Table 1 The primers for quantitative RT-PCR

From: Hypoxia-responsive circular RNA circAAGAB reduces breast cancer malignancy by activating p38 MAPK and sponging miR-378 h

Gene/miRNA

Primer

Sequence (5ʹ to 3ʹ)

Reverse transcription

 miR-3127-5p

GTTGGCTCTGGTGCAGGGTCCGAGGTATTCGCACCAGAGCCAACCTTCCCA

 miR-671-5p

GTTGGCTCTGGTGCAGGGTCCGAGGTATTCGCACCAGAGCCAACCTCCAGC

 miR-422a

GTTGGCTCTGGTGCAGGGTCCGAGGTATTCGCACCAGAGCCAACGCCTTCT

 miR-378i

GTTGGCTCTGGTGCAGGGTCCGAGGTATTCGCACCAGAGCCAACCCTTCTG

 miR-378 h

GTTGGCTCTGGTGCAGGGTCCGAGGTATTCGCACCAGAGCCAACCCATCTG

 U6 snRNA

CGCTTCACGAATTTGCGTGTCAT

Quantitative RT-PCR

 circAAGAB

Forward

CTGAATGCCAATGTGTGGTC

Reverse

CTATCAAGGCCCGATTTTTG

 AAGAB

Forward

ACAGCACACAAA AATCGGGC

Reverse

ATTGGCATTCAGGGCTTGGA

 AAGAB exon 2

Forward

AGTGACTTCCAATGATGCTGT G

Reverse

TGTGTGCTGTCAAAGTAAACCAC

 18S rRNA

Forward

TCAACTTTCGATGGTAGTCGCCGT

Reverse

TCCTTGGATGTGGTAGCCGTTTCT

 GAPDH

Forward

AACGGGAAGCTTGTCATCAATGGA AA

Reverse

GCATCAGCAGAGGGGGCAGAG

 BCAR4

Forward

GTTCCGATGCTTGTCTTGCTC

Reverse

CCAAAGACGAAGATGCCAGG

 U6 snRNA

Forward

GCTTCGGCAGCACATATACTAAAAT

Reverse

CGCTTCACGAATTTGCGTGTCAT

 miR-3127-5p

Forward

CGATCAGGGCTTGTGGAA

Reverse

GTGCAGGGTCCGAGGT

 miR-671-5p

Forward

CGGAGGAAGCCCTGGA

Reverse

GTGCAGGGTCCGAGGT

 miR-422a

Forward

CGCGACTGGACTTAGGGTC

Reverse

GTGCAGGGTCCGAGGT

 miR-378i

Forward

CGCGACTGGACTAGGAGT

Reverse

GTGCAGGGTCCGAGGT

 miR-378 h

Forward

CGCACTGGACTTGGTGT

Reverse

GTGCAGGGTCCGAGGT

 KIAA1522

Forward

CCAGGACAACGTCTTCTTTCC

Reverse

CAGCCACCCTTGTTCAGTTTC

 NKX3-1

Forward

CCCACACTCAGGTGATCGAG

Reverse

GAGCTGCTTTCGCTTAGTCTT

 PHC3

Forward

ACAGCAGTCAAGTATGTCCCA

Reverse

CTTGCCGTTAGGGTAGGGG

 ELAC1

Forward

GCTGGTCTTCCATTATGTGGTT

Reverse

GTGAAAGAGGCGAAATGCTTTT

 ZNF124

Forward

AAAGCCTTAGGTTTTTCCCGTT

Reverse

ACATGGATAGGGTTCTTCACCA

 RAB10

Forward

CTGCTCCTGATCGGGGATTC

Reverse

TGATGGTGTGAAATCGCTCCT

 KCNIP2

Forward

AATGTCCCAGCGGAATTGTCA

Reverse

GAGCCATCATGGTTGGTGTCA

 PLCXD2

Forward

GACTCGTTTCTTACACAGCACC

Reverse

AGCGTCAAACTTTCCACACTG

 JADE3

Forward

GACGTTCTGTTTATCCGACCC

Reverse

CCACAACCCATTTCTGCAAGG

 FUS

Forward

AGCTGGTGACTGGAAGTGTC

Reverse

GGTAGCCGCCTCGATCATAG

 EGR1

Forward

CCAGTGGAGTCCTGTGATCG

Reverse

TTCATCGCTCCTGGCAAACT