Fig. 3

Gene network analysis in SOX2OT knocked down cells. a The graphic presentation of modules in the SOX2OT knocked down differentially expressed gene network. For ease of annotation, the network was first clustered with GLay and then the modules were used for biological process enrichment with GeneCodis. The most significant enriched GO terms are labeled with FDR corrected hyper geometric p value. The selected nodes for following expression confirmation are highlighted in the modules. Notice their edges in red color. b The gene expression fold changes confirmed with QRT-PCR in SOX2OT knocked down cells. The bars represent mean ± SE