Cancer Cell International

Table 2 Candidate hub genes identified by co-expression and MCODE methods

From: Identification of biomarkers of chromophobe renal cell carcinoma by weighted gene co-expression network analysis

Gene symbol	Co-expression analysis				MCODE analysis
Gene symbol	GS.Pathologic_stage	GS.Neoplasm_status	GS.Survival_status	MM	Connectivity degree	MCODE_score
ASPM	0.3698	0.3874	0.5063	0.9254	50	39
KIF14	0.4161	0.3991	0.4492	0.9193	50	39
TPX2	0.4019	0.3765	0.4620	0.9429	53	39
NEK2	0.3730	0.3988	0.5093	0.9240	52	39
MKI67	0.4088	0.4114	0.4970	0.9361	53	39
NCAPG	0.3806	0.4425	0.5053	0.9282	51	39
DLGAP5	0.3549	0.4440	0.5035	0.9360	54	39
KIF4A	0.4325	0.4104	0.4824	0.9581	56	39
KIF20A	0.4190	0.4013	0.4783	0.9259	50	39
FOXM1	0.4174	0.4091	0.4626	0.9225	51	39
CDKN3	0.3534	0.4401	0.5048	0.9209	49	39
BIRC5	0.3988	0.4194	0.4129	0.8940	48	39
CDC25C	0.4268	0.4004	0.4570	0.9084	47	39
CCNB2	0.3533	0.3397	0.4443	0.9002	46	39
PBK	0.3964	0.4196	0.4888	0.8895	47	39
POLQ	0.4818	0.3971	0.5722	0.9018	45	39
MELK	0.4246	0.3989	0.4592	0.9284	51	39
CENPA	0.4223	0.4006	0.4285	0.9002	47	39
SKA1	0.4019	0.4533	0.5004	0.9159	51	39
HJURP	0.4001	0.3558	0.4416	0.9128	50	39
TROAP	0.3900	0.3643	0.4276	0.8959	46	39
BUB1	0.3927	0.3514	0.4558	0.8284	39	39
ERCC6L	0.4544	0.3660	0.5429	0.9243	50	39
TTK	0.4380	0.3833	0.5951	0.8440	40	39
MCM10	0.4108	0.4499	0.3941	0.8043	41	39
CDC45	0.3597	0.4241	0.4214	0.8697	45	39
GTSE1	0.4334	0.2835	0.4238	0.9186	50	39
NEIL3	0.4386	0.4524	0.4932	0.9085	48	39
DEPDC1	0.4054	0.4806	0.5418	0.9443	54	39

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