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Table 1 Oligonucleotides used in this study

From: Promoter methylation, transcription, and retrotransposition of LINE-1 in colorectal adenomas and adenocarcinomas

Gene

Sequence (5′ To 3′)

Product (bp)

Application

LINE-1 expression primers (GenBank accession number L19088) (25)

F: TGAGAACGGGCAGACAGACT

R: AGGTCTGTTGGAATACCCTGCC

129

RT-qPCR

LINE-1 AQAMA Primers

F: GGGTTTATTTTATTAGGGAGTGTTAGA

R: TCACCCCTTTCTTTAACTCAAA

148

qPCR

LINE-1 AQAMA methylation specific probe

FAM-TGCGCGAGTCGAAGT-BHQ1

–

qPCR

LINE-1 AQAMA unmethylation specific probe

HEX-TGTGTGAGTTGAAGTAGGG-BHQ1

–

qPCR