|
Category
|
Rank methods in cytoHubba
|
|---|
|
Degree
|
EPC
|
Closeness
|
Radiality
|
|---|
|
Genes top 20
|
FN1
|
FN1
|
FN1
|
FN1
|
| |
CD44
|
COL4A1
|
COL4A1
|
COL4A1
|
| |
COL4A1
|
ANGPT2
|
ANXA2
|
ANXA2
|
| |
ANXA2
|
COL5A2
|
CD44
|
ANGPT2
|
| |
COL5A2
|
ANXA2
|
ANGPT2
|
LAMB1
|
| |
ANGPT2
|
COL3A1
|
LAMB1
|
COL1A1
|
| |
COL3A1
|
COL1A1
|
SERPINH1
|
SERPINH1
|
| |
COL1A1
|
CALD1
|
COL5A2
|
CALD1
|
| |
CLIC1
|
CD44
|
COL1A1
|
CD44
|
| |
CALD1
|
SERPINH1
|
CALD1
|
NAMPT
|
| |
LAMB1
|
COL1A2
|
COL1A2
|
LAMC1
|
| |
SERPINH1
|
NAMPT
|
LAMC1
|
COL5A2
|
| |
COL1A2
|
LAMB1
|
NAMPT
|
COL1A2
|
| |
LAMC1
|
LAMC1
|
CLIC1
|
PDPN
|
| |
NAMPT
|
CLIC1
|
COL3A1
|
COL4A2
|
| |
ADAM12
|
COL4A2
|
COL4A2
|
GALNT2
|
| |
CAV1
|
ADAM12
|
PDPN
|
P4HB
|
| |
COL4A2
|
CAV1
|
P4HB
|
CXCR4
|
| |
CD93
|
NOX4
|
ADAM12
|
CLIC1
|
| |
PDPN
|
ENPEP
|
GALNT2
|
COL3A1
|
- Top 20 genes are determined by six algorithms respectively in cytoHubba. The bold ones represent selected collagen genes; EPC Edge percolated component
