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Table 2 Top 10 up- and down-regulated DEmRNAs/DElncRNAs in bone metastasis vs lung/liver metastasis

From: New insight into long non-coding RNAs associated with bone metastasis of breast cancer based on an integrated analysis

mRNA lncRNA
ID Symbol p-value Regulation ID Symbol p-value Regulation
Bone metastasis vs lung metastasis
 25903 OLFML2B 4.24E−08 Up 284688 LOC284688 0.001117 Up
 2042 EPHA3 6.89E−08 Up 100192378 LOC100192378 0.001644 Up
 4322 MMP13 2.04E−07 Up 286411 RP1-177G6.2 0.001895 Up
 7424 VEGFC 3.50E−07 Up 100505881 LOC100505881 0.002948 Up
 57125 PLXDC1 3.59E−07 Up 220070 C11orf76 0.00331 Up
 2200 FBN1 4.61E−07 Up 29034 CPS1-IT 0.003648 Up
 1301 COL11A1 6.15E−07 Up 642852 LOC642852 0.00492 Up
 2028 ENPEP 7.09E−07 Up 378938 MALAT1 0.005842 Up
 1513 CTSK 7.73E−07 Up 100126793 GHRLOS 0.006006 Up
 3381 IBSP 8.25E−07 Up 100289509 LOC100289509 0.006176 Up
 6439 SFTPB 1.42E−08 Down 255480 LOC255480 1.05E-05 Down
 6440 SFTPC 5.58E−08 Down 401491 FLJ35024 0.001445 Down
 6441 SFTPD 8.85E−08 Down 643650 LOC643650 0.002133 Down
 28959 TMEM176B 2.57E−07 Down 100132741 LOC100132741 0.002262 Down
 91316 LOC91316 4.73E−07 Down 154822 LOC154822 0.00236 Down
 54101 RIPK4 6.18E−07 Down 100131551 LOC100131551 0.002396 Down
 91353 IGLL3P 1.22E−06 Down 100128511 LOC100128511 0.003006 Down
 745 C11orf9 2.20E−06 Down 100505601 LOC100505601 0.00489 Down
 718 C3 3.17E−06 Down 84847 MGC16075 0.005031 Down
 3507 IGHM 4.77E−06 Down 339789 C2orf46 0.005971 Down
Bone metastasis vs liver metastasis
 4318 MMP9 2.77E−08 Up 255031 FLJ35390 0.002272 Up
 5396 PRRX1 4.19E−08 Up 10984 KCNQ1OT1 0.002645 Up
 1292 COL6A2 6.77E−08 Up 84815 MGC12916 0.003608 Up
 1464 CSPG4 1.31E−07 Up 200197 C1orf126 0.007723 Up
 1291 COL6A1 9.48E−07 Up 149830 PRNT 0.007785 Up
 1749 DLX5 1.38E−06 Up 400999 FLJ42351 0.008556 Up
 4322 MMP13 4.08E−06 Up 100131814 NCRNA00271 0.009051 Up
 1301 COL11A1 5.77E−06 UP 255512 LOC255512 0.010037 Up
 7431 VIM 7.59E−06 Up 641518 LOC641518 0.01096 Up
 169611 OLFML2A 8.39E−06 Up 283547 LOC283547 0.011532 Up
 2266 FGG 0 Down 140828 NCRNA00261 0.000205 Down
 2244 FGB 3.11E−15 Down 100507008 LOC100507008 0.000512 Down
 350 APOH 1.33E−14 Down 791114 PWRN1 0.001197 Down
 2638 GC 5.75E−13 Down 283120 H19 0.002122 Down
 2243 FGA 6.04E−13 Down 399806 FLJ41350 0.004141 Down
 338 APOB 1.40E−12 Down 644246 LOC644246 0.004277 Down
 259 AMBP 5.35E−12 Down 285972 LOC285972 0.004303 Down
 1571 CYP2E1 5.65E−12 Down 255167 LOC255167 0.004445 Down
 3273 HRG 8.57E−12 Down 149134 LOC149134 0.006425 Down
 345 APOC3 1.18E−11 Down 619423 FAM85A 0.00673 Down
  1. DEmRNAs differentially expressed mRNAs, DElncRNAs differentially expressed lncRNAs