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Table 2 Results of PICRUSt KEGG pathway enrichment analysis

From: Microbial and molecular differences according to the location of head and neck cancers

 

Level 1

Level 2

Level 3

Rab.win. non-oral

Rab.win.oral

diff.btw

Oral rich bacteria

Unclassified

Cellular Processes and Signaling

Germination

− 0.421

8.339

9.005

Human diseases

Neurodegenerative diseases

Huntington's disease

0.541

8.378

7.972

Metabolism

Metabolism of Terpenoids and Polyketides

Biosynthesis of siderophore group nonribosomal peptides

1.232

8.327

7.111

Metabolism

Xenobiotics Biodegradation and Metabolism

Atrazine degradation

1.559

8.333

6.271

Human diseases

Neurodegenerative diseases

Prion diseases

2.353

8.343

6.171

Non-oral rich bacteria

Metabolism

Glycan biosynthesis and metabolism

Other glycan degradation

10.295

− 0.612

− 10.855

Cellular processes

Transport and catabolism

Lysosome

10.270

− 0.458

− 10.537

Metabolism

Glycan biosynthesis and metabolism

Glycosphingolipid biosynthesis—globo series

10.230

0.474

− 9.590

Unclassified

Cellular processes and signaling

Electron transfer carriers

10.290

1.406

− 8.713

Metabolism

Glycan biosynthesis and metabolism

Glycosaminoglycan degradation

10.275

1.553

− 8.588

  1. BH < 0.05 compared to the oral and non-oral (ALDEx2); BH Benjamini-Hochberg
  2. diff.btw cut off > abs(6)
  3. rab.win.non-oral: a vector containing the median clr value for each feature in non-oral, clr centred log-ratio
  4. rab.win.oral: a vector containing the median clr value for each feature in oral
  5. diff.btw: a vector containing the per-feature median difference between condition non-oral and oral
  6. PICRUSt phylogenetic investigation of communities by reconstruction of unobserved states; KEGG Kyoto Encyclopedia of Genes and Genomes