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Table 1 Role of lncRNA/miRNA/mRNA axis in promoting ccRCC progression

From: A review on the role of long non-coding RNA and microRNA network in clear cell renal cell carcinoma and its tumor microenvironment

LncRNA

MiRNA

Gene

Biological behavior of ccRCC

Types of ccRCC tissues and cell lines

Refs.

PVT1

miR-328-3p,

miR-145-5p,

miR-16-5p,

miR-200s

FAM193B,

TBX15,

BMI1,

ZEB1,

ZEB2

Proliferation, migration, invasion, apoptosis, cell cycle, EMTa

Tissues: 210 NTb

Cells: 769-P, UMRC6, RCCJF, A498, ACHN, 786-O, OS-RC-2, Caki-1, HEK-293T, HK-2

[27, 30, 31, 43]

HILAR

miR-613,

miR-206,

miR-1-1-3p

Jagged1,

CXCR4

Proliferation, migration, invasion, EMT

Cells: ACHN, Caki-1, SN12-PM6

[44]

TUG1

miR-299-3p,

miR-9,

miR-31-5p,

miR-196a

VEGFR,

YAP,

FLOT1,

AKT,

ERK,

JNK

Proliferation, migration, invasion, apoptosis, autophagy, EMT

Tissues: 99 NT

Cells: ACHN, OS-RC-2, 786-O, 769-P, A498, A704, HEK-293, HK-2

[45,46,47,48]

ITGB2-AS1

miR-328-5p

HMGA1

Proliferation, apoptosis

Tissues: 33 NT

Cells: OS-RC-2, SW839, A498, SN12-PM6, Caki-1, HK-2

[49]

LUCAT1

miR-495-3p,

miR-375

SATB1,

YAP1

Proliferation, migration, invasion

Tissues: 126 NT

Cells: 786-O, Caki-1, A498, 769-P, ACHN, HK-2

[50, 51]

MEG8

miR-495-3p

G3BP1

Proliferation, migration, invasion

Tissues: 62 NT

Cells: A498, Caki-1,786-O, 769-P, ACHN

[52]

RP11-436H11.5

miR-335-5p

BCL-W

Proliferation, invasion

Tissues: 20 NT

Cells: A498, 786-O, OS-RC-2

[53]

PCED1B-AS1

miR-484

ZEB1

Proliferation, migration, EMT

Tissues: 40 NT

Cells: 786-O, A498, ACHN, Caki-1, HK-2

[54]

CRNDE

miR-136-5p

N-Cadherin,

Vimentin

Proliferation, migration, invasion, EMT

Tissues: 45 NT

Cells: A498, ACHN

[55]

DARS-AS1

miR-194-5p

DARS

Proliferation, apoptosis

Tissues: 70 NT

Cells: ClearCa-1, HH332, Caki-1, KMRC-2, KN-41, HK-2

[39]

LINC01094

miR-224-5p,

miR-184

CHSY1,

SLC2A3

Proliferation, migration, EMT

Tissues: 56 NT

Cells: ACHN, 769-P, Caki-1, 786-O, HK-2

[56, 57]

LINC02747

miR-608

TFE3

Proliferation

Tissues: 70 NT

Cells: 786-O, ACHN, Caki-1, Caki-2

[58]

LINC00973

miR-7109-3p

Siglec-15

Immune escape

Tissues: 100 NT

Cells: 786-O, 769-P, A704, A498, ACNH, Caki-1, Caki-2, RCC4, HK-2

[59]

LINC01426

miR-423-5p

FOXM1

Proliferation, migration

Cells: A498, ACHN, Caki-1, 786-O, HEK-293T, HK-2

[60]

LINC00511

miR-625

CCND1

Proliferation, migration, invasion, apoptosis, cell cycle

Tissues: 49 NT

Cells: A498, 786-O, ACHN, Caki-2, HK-2

[41]

HOXA11‐AS

miR-146b-5p

MMP16

Proliferation, invasion, apoptosis, EMT

Tissues: 52 NT

Cells: ACHN, 786-O, A498, OS-RC-2, HK-2

[61]

CDKN2B-AS1

miR-141

Cyclin D1,

Cyclin D2

Proliferation, migration, invasion, apoptosis

Cells: RPTEC, ACHN, Caki-1

[62]

DNAJC3-AS1

miR-27a-3p

PRDM14

Proliferation, migration, invasion, apoptosis

Tissues: 30 NT

Cells: 769-P, ACHN, Caki-1, 786-O, HK-2

[63]

FGD5-AS1

miR-5590-3p

ERK/AKT

Proliferation, migration, invasion, EMT

Tissues: 28 NT

Cells: 786-O, ACHN, SN12-PM6, HK-2

[64]

HCG18

miR-152-3p

RAB14

Proliferation, migration, invasion

Tissues: 32 NT

Cells: Caki-1, 786-O, 769-P, ACHN, HK-2

[65]

SNHG12

miR-200c-5p,

miR-30a-3p,

miR-129-5p

COL11A1, RUNX2,

WNT2,

IGF-1R,

MDM4

Proliferation, invasion, apoptosis, cell cycle

Tissues: 148 NT

Cells: OS-RC-2, 786-O, Caki-1, Caki-2, A498, ACHN, 769-P, HK-2

[66,67,68]

SNHG5

miR-205-5p,

miR-363-3p

ZEB1,

Twist

Proliferation, migration, invasion, apoptosis, EMT

Tissues: 20 NT

Cells: ACHN, 786-O, A498, SN12-PM6, SW13, Caki-1, HK-2

[69, 70]

PCAT1

miR-656,

miR-539

YAP

Proliferation, migration, invasion

Tissues: 85 NT

Cells: 786-O, Caki-2, 769-P, OS-RC-2, ACHN, HK-2

[71]

H19

miR-29a-3p

E2F1

Proliferation, migration, invasion

Tissues: 30 NT

Cell: 786-O

[72]

NNT-AS1

miR-137

Y-box

Proliferation, migration and invasion

Tissues: 40 NT

Cells: 786-O, OS-RC-2, A498, Caki-1, HEK-293T

[73]

HCP5

miR-214-3p,

miR-140-5p

MAPK1,

IGF1R

Proliferation, migration, invasion, apoptosis, cell cycle

Tissues: 142 NT

Cells: 786-O, Caki-1, Caki-2, ACHN, A498, 769-P, OS-RC-2, HEK-293T, HK-2

[74, 75]

MIR4435-2HG

miR-513a-5p

KLF6

Proliferation, migration, invasion

Tissues: 40 NT

Cells: 786-O, 769-P, Caki-1, Caki-2, ACHN, A498, HK-2, HEK-293T

[76]

PCGEM1

miR-433-3p

FGF2

Proliferation, migration, apoptosis

Tissues: 47 NT

Cells: OS-RC-2, ACHN, A498, 786-O

[77]

MALAT1

miR-200s,

miR-194-5p,

miR‐203,

miR-205,

miR-429,

miR-182-5p,

miR-1271-5p

ZEB2,

ACVR2B, BIRC5,

KIAA1324

Proliferation, migration, invasion, apoptosis, cell cycle

Tissues: 531 NT

Cells: 786-O, ACHN, SN12-PM6, OS-RC-2, Caki-2, Caki-1, A498, HK-2

[10, 36, 78,79,80,81,82]

RCAT1

miR-214-5p

E2F2

Proliferation, migration, invasion

Tissues: 52 NT

Cells: ACHN, 786-O, 769-P, Caki-1, A498, HK-2

[83]

MSC‐AS1

miR-3924

WNT5A

Proliferation, migration

Tissues: 27NT

Cells: 786-O, 769-P, A498, Caki-1, HK-2

[84]

ROR

miR-206

VEGF

Proliferation, migration and invasion

Tissues: 36 NT

Cells: Caki-1, Caki-2, HK-2

[85]

ZFAS1

miR-10a

SKA1

Proliferation, migration and invasion

Tissues: 20 NT

Cells: 786-O, Caki-1, ACHN, HEK-293T, HK-2

[86]

SNHG3

miR-139-5p,

miR-10b-5p

TOP2A; BIRC5

Proliferation, migration, invasion

Tissues: 70 NT

Cells: A498, ACHN, Caki-1, 786-O, HK-2

[87, 88]

SNHG17

miR-328-3p

H2AX

Proliferation, migration, invasion, apoptosis, cell cycle

Tissues: 84 NT

Cells: 786-O, ACHN, Caki-1, 769-P, HK-2

[89]

UCA1

miR-495,

miR-182-5p

EZH2,

DLL4

Proliferation, migration, cell cycle

Tissues: 130 NT

Cells: 786-O, ACHN, Caki-1, Caki-2, HEK-293T, HK-2

[90, 91]

LOXL1-AS1

miR-589-5p

CBX5

Proliferation, migration

Tissues: 60 NT

Cells: 786-O, A498, 769-P, HEK-293

[92]

HIF1A-AS2

miR-130a-5p

ERBB2

Proliferation, migration, invasion, apoptosis, cell cycle

Tissues: 42 NT

Cells: ACHN, OSRC-2, 786-O, Caki-1, HK-2

[93]

HOTTIP

miR-615-3p

IGF-2

Proliferation, migration, invasion, apoptosis, cell cycle

Tissues: 57 NT

Cells: A498, 786-O, Caki-1, Caki-2, ACHN, HK-2, HEK-293T

[94]

LINC00641

miR-340-5p

c-Myc, CyclinD1, MMP-2

Proliferation and invasion

Tissues: 48 NT

Cells: GRC-1, 786-O, SN12-PM6, A498, ACHN, HK-2

[95]

SNHG1

miR-129-3p,

miR-137

miR-103a

STAT3,

PD-L1

HMGA2

Proliferation, migration, invasion, cell cycle, apoptosis, EMT

Tissues: 60 NT

Cells: ACHN, A498, 786-O, Caki-1, HK-2

[96,97,98]

LINC01133

miR-30b-5p

Rab-3D

Proliferation, migration, invasion

Tissues: 34 NT

Cells: ACHN, A498, 786-O, SN12-PM6, HK-2

[99]

HOTAIR

miR-217,

miR-138,

miR-200c,

miR-204,

miR-124,

miR-203,

miR-141

HIF-1α,

AXL,

EZH2,

VIM,

ZEB1,

ADAM9, CCND2, VEGFA,

ZEB2,

ST8SIA4;

Proliferation, migration, invasion, apoptosis, cell cycle, EMT

Tissues: 54 NT

Cells: ACHN, 786-O, 769-P, A498, Caki-1, HK-2

[100,101,102,103,104]

SBF2-AS1

miR-338-3p

ETS1

Proliferation, migration, invasion, apoptosis, autophagy

Tissues: 46 NT

Cells: Caki-1, UT14, UT16, UT33a, 768-O, HK-2

[105]

MIAT

miR-29c

LOXL2

Proliferation, migration, invasion

Tissues: 45 NT

Cells: Caki-1, ACHN, 786-O, HK-2

[106]

ARAP1-AS1

miR-361-3p

PGF

Proliferation, migration, apoptosis

Tissues: 16 NT

Cells: HK-2, Caki-1, A498

[107]

MIR155HG

miR-155-5p,

miR-155-3p

MMP2, MMP9

Proliferation, migration, invasion

Cells: HKC-5, LoMet-ccRCC, 786-O, A498, Caki-1, HK-2

[108]

DUXAP8

miR-126

CED-9

Proliferation, invasion

Cells: A498, 786-O

[109]

SNHG16

miR-1303-p

STARD9

Proliferation, apoptosis

Tissues: 45 NT

Cells: A498, 786-O, Caki-1, OSRC-2, HK-2

[110]

DLX6-AS1

miR-26a

PTEN

Proliferation, apoptosis

Tissues: 52 NT

Cells: A498, ACHN, Caki-1, Caki-2, 786-O, G401, HK-2

[111]

EMBP1

miR-9-5p

KLF4, NANOG, CCNE2

Proliferation, migration, invasion, EMT

Tissues: 65 NT

Cells: ACHN, Caki-1, HK-2

[112]

LINC02738

miR-20b

SOX4

Proliferation, invasion, apoptosis

Tissues: 50 NT

Cells: ACHN, 786-O, OS-RC-2, Caki-2, HK-2

[113]

GAPLINC

miR-135b-5p

CSF1

Proliferation, migration

Cells: A498, OSRC-2, ACHN, 786-O, Caki-1, HK-2

[114]

SNHG4

miR-204-5p

RUNX2

Proliferation, migration, invasion, apoptosis

Tissues: 99 NT

Cells: Caki-1, Caki-2, ACHN, 786-O, 769-P, HK-2

[115]

TTN-AS1

miR-195

Cyclin D1

Proliferation, cell cycle

Tissues: 145 NT

Cells: ACHN, 786-O, SN12-PM6, HK-2

[116]

ZFPM2-AS1

miR-130a-3p

ESCO2

Proliferation, migration, invasion, apoptosis

Tissues: 60 NT

Cells: 786-O, KETR3, G401, HK-2

[117]

SLC16A1-AS1

miR-143-3p

SLC7A11

Proliferation, migration, invasion

Cells: 786-O, A498, Caki-1, HK-2

[118]

DLEU2

miR-30a-5p

ZEB2

Proliferation, invasion

Tissues: 40 NT

Cells: ACHN, Caki-1, 769-P, 786-O, HK-2

[33]

LINC01232

miR-204-5p

RAB22A

Proliferation, migration, invasion

Tissues: 122 NT

Cells: Caki-1, A498, KN-41, 786-O, ClearCa-1, HK-2

[119]

GIHCG

miR-499a-5p

XIAP

Proliferation, migration, apoptosis, cell cycle

Cells: HK-2, Caki-1, 786-O, A498, SN12C-PM6

[40]

CYTOR

miR-136-5p

MAT2B

Proliferation, invasion, apoptosis

Cells: 786-O, Caki-1

[120]

CASC19

miR-532

ETS1

Proliferation, migration, apoptosis

Tissues: 51 NT

Cells: Caki-1, A498,786-O

[121]

FTX

miR-4429

UBE2C

Proliferation, migration, invasion, cell cycle

Tissues: 51 NT

Cells: A498, A704, SN12C, 769-P

[42]

  1. aEpithelial-Mesenchymal Transition
  2. bPaired tumor and adjacent tissues