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Table 8 Project Hope Prediction Analysis

From: Non-synonymous SNPs variants of PRKCG and its association with oncogenes predispose to hepatocellular carcinoma

Residues

Hydrophobicity

Domain

Size

Charge

Conservation site

Amino acid Properties

C52S

Wild > Mutant

C1A

-

-

Highly Conserved

Perturbed folding;

Loss of Hydrophobic interactions

C114Y

Wild > Mutant

C1B

Wild < Mutant

-

Highly Conserved

Bumps/repulsions of ligands;

Loss of Hydrophobic interactions;

Disrupted folding

D115Y

Wild < Mutant

C1B

Wild < Mutant

Wild-Negative,

Mutant-Neutral

Highly Conserved

Loss of hydrogen bonds;

Disrupted correct folding;

Bumps/repulsions of ligands

G128R

Wild > Mutant

C1B

Wild < Mutant

Wild- Neutral,

Mutant-Positive

Highly Conserved

Bumps/repulsions of ligands;

Disrupted folding interactions

C131Y

Wild > Mutant

C1B

Wild < Mutant

-

Highly Conserved

Bumps/repulsions of ligands;

Disrupted folding interactions;

Loss of Hydrophobic interactions

V138M

-

C1B

Wild < Mutant

-

Highly Conserved

Bumps/repulsions of ligands;

Disrupted folding interactions

C150R

Wild > Mutant

C1B

Wild < Mutant

Wild-Neutral,Mutant-Positive

Highly Conserved

Bumps/repulsions of ligands;

Disrupted folding interactions;

Loss of Hydrophobic interactions

G159R

Wild > Mutant

Between C1B and C2

Wild < Mutant

Wild-Neutral Mutant-Positive

Highly Conserved

Bumps/repulsions of ligands;

Disrupted folding interactions

G360S

-

C3/C4

Wild < Mutant

-

Highly Conserved

Bumps/repulsions of ligands;

Disrupted folding interactions

L403P

-

C3/C4

Wild > Mutant

-

Highly Conserved

Bumps/repulsions of ligands;

Disrupted folding interactions

L468P

-

C3/C4

Wild > Mutant

-

Highly Conserved

Bumps/repulsions of ligands;

Disrupted folding interactions

D480Y

Wild < Mutant

C3/C4

Wild < Mutant

Wild-Negative

Mutant- Neutral

Highly Conserved

Loss of hydrogen bonds;

Perturbed folding

Y521C

Wild < Mutant

C3/C4

Wild > Mutant

-

Highly Conserved

Bumps/repulsions of ligands;

Disrupted folding interactions;

Loss of hydrogen bonds

R597H

-

C3/C4

Wild > Mutant

Wild- Positive

Mutant-Neutral

Highly Conserved

Loss of ionic interactions;

Disrupted folding

F643L

-

C-Tail

Wild > Mutant

-

Highly Conserved

Loss of hydrophobic interactions;

Disrupted folding