Fig. 10From: The effect of matrices on the gene expression profile of patient-derived head and neck carcinoma cells for in vitro therapy testingUpregulated hallmark pathways shared with previous findings on pathways associated with collagenase dissociation. Several of the upregulated hallmark pathways we found in cultured cells and freshly digested single cells compared to fresh tissue sample were also found to be associated with collagenase dissociation at 37 °C reported by O’Flanagan et al. [27]. The pathways that are marked in red are shared with the results from O’Flanagan et al. NES, normalized enrichment scoreBack to article page