Skip to main content

Table 2 Types of genetic polymorphisms (SNPs) in various drugs-related genes associated with the outcome of pharmacotherapy of prostate cancer patients

From: Analysis of genetic biomarkers, polymorphisms in ADME-related genes and their impact on pharmacotherapy for prostate cancer

Gene Name

Function of gene

rs number

Type of polymorphism

Chromosome

Therapeutic agents

References

CYP17A1

Metabolism of androgen

rs6162

sSNP

10

Abiraterone acetate

[152]

rs743572

rSNP

[153]

CYP19A1

Metabolism of androgen

rs1870050

iSNP

15

Anastrozole, Letrozole

[154]

rs4775936

CYP1B1

Encodes drug metabolizing enzyme

rs1056836

cSNP

2

Docetaxel

[155]

HSD3B1

Metabolism of androgen

rs1047303

cSNP

1

Abiraterone acetate

[156]

rs1856888

gSNP

[142]

HSD17B2

Metabolism of androgen

rs4243229

iSNP

16

Enzalutamide

[152]

rs7201637

HSD17B3

Metabolism of androgen

rs2257157

iSNP

9

Abiraterone acetate

[152]

HSD17B4

Metabolism of androgen

rs7737181

iSNP

5

Abiraterone acetate

[145]

AKR1C3

Metabolism of androgen

rs12529

cSNP

10

Abiraterone acetate

[157]

ABCB1

Encodes protein act as drug excretion pump

rs2032582

cSNP

7

Docetaxel + Thalidomide

[158]

rs1128503

rs1045642

ABCB11

encodes protein act as drug excretion pump

rs7602171

iSNP

2

Docetaxel + Thalidomide

[159]

ABCG2

encodes protein act as drug excretion pump

rs2231142

cSNP

4

Docetaxel + Vinorelbine/Estramustine phosphate

[160]

SLCO1B3

Androgen transporter

rs4149117

cSNP

12

Docetaxel

[161]

SLCO2B1

Encodes protein act as androgen transporter

rs1077858

iSNP

11

Docetaxel

[162]

rs1789693

iSNP

[163]

rs12422149

cSNP

[164]

GNRH2

Related to the synthesis of androgen

rs6051545

cSNP

20

Abiraterone acetate

[165]

SHBG

Androgen-binding protein

rs6259

cSNP

17

Enzalutamide

[150]

AR

Steroid receptor

CAG repeat

Coding region

Xq11-12

Docetaxel

[166]

ATP7A

Copper level regulator

rs2227291

SNV

X

Cisplatin

[167]

ABCC6

Transporter protein

rs2238472

SNV

16

Docetaxel + Thalidomide

[168]

ABCB4

MRP6

rs2302387

SNV

7

Docetaxel + Thalidomide

[169]

ESR1

Steroid receptor

rs1062577

rSNP

6

Docetaxel + Thalidomide

[152, 170]

rs2234693

iSNP

rs9340799

NR3C2

Steroid receptor

rs5522

cSNP

4

Docetaxel + Thalidomide

[165]

YB-1

Transcription factor

rs12030724

iSNP

1

Abiraterone

[171]

HIF1A

Transcription factor

rs11549465

cSNP

14

Docetaxel

[171]

ARRDC3

Target gene of AR

rs2939244

rSNP

5

Abiraterone

[149]

FLT1

Androgen-binding

rs9508016

rSNP

13

Enzalutamide

[149]

SKAP1

Protein steroid receptor

rs6054145

rSNP

20

Abiraterone acetate

[149]

FBXO32

Steroid receptor

rs7830622

rSNP

8

Abiraterone acetate

[67]

BNC2

Steroid RECEPTOR

rs16934641

rSNP

9

Abiraterone acetate

[149]

TACC2

Transcription

rs3763763

rSNP

10

Bicalutamide

[149]

ALPK1

Factor

rs2051778

rSNP

4

Enzalutamide

[172]

LSAMP

Transcription

rs13088089

rSNP

3

Abiraterone

[173]

CCL17

Transcription

rs13088089

rSNP

3

Leuprolide

[173]

ALPK1

Transcription factor

rs2051778

rSNP

4

Enzalutamide

[174]

LSAMP

Transcription

rs13088089

rSNP

3

Bicalutamide

[175]

NAT2

Xenobiotics detoxifier

rs1799931

SNV

8

Docetaxel + Thalidomide

[176]

PSMD7

NFκB targeted gene

rs2387084

rSNP

16

Enzalutamide

[173]

PPAR-δ

Fatty acid uptake, transport and

β-oxidation

rs6922548

SNP

6

Docetaxel + Thalidomide

[177]

rs2016520

[178]

rs1883322

[178]

rs3734254

[179]

rs7769719

[168]

rs4148943

[168]

MON1B

NFκB targeted gene

rs284924

rSNP

16

Abiraterone acetate

[67]

GSTM3

Antioxidant

rs7483

cSNP

1

Docetaxel + Thalidomide

[180]

GSTP1

Antioxidant

rs1138272

cSNP

11

Docetaxel + Thalidomide

[126]

CAT

Antioxidant

rs564250

gSNP

11

Docetaxel + Thalidomide

[159]

CHST3

Development and maintenance of the skeleton

rs12418

SNV

10

Docetaxel + Thalidomide

[160]

rs730720

rs4148950

rs1871450

rs4148945

SLC28A3

Nucleoside transporter

rs56350726

cSNP

9

Docetaxel + Thalidomide

[161]

SLC5A6

Transporter

rs1395

cSNP

2

Docetaxel + Thalidomide

[159]

SLC10A2

Sodium/bile acid Co-transporter

rs2301159

SNV

13

Leuprolide

[176]

SULT1C2

Encode Sulfotransferase 1C2 in humans

rs1402467

SNP

2

Docetaxel + Thalidomide

[]

LRP2

Encode protein act as a transporter for Sterol and Steroid

rs6433107

iSNP

2

Abiraterone acetate

[182]

rs3944004

rs830994

rs3770613

rs831003

EGF

Growth factor

rs4444903

rSNP

4

Degarelix

[183]

IRS2

Growth factor

rs7986346

gSNP

13

Degarelix

[149]

TGFBR2

TGF-β signaling

rs3087465

iSNP

3

Abiraterone acetate

[184]

BMP5

TGF-β signaling

rs317027

gSNP

4

Abiraterone acetate

[172]

IL18

Cytokine

rs187238

rSNP

11

Docetaxel + Thalidomide

[185]

APC

Wnt signaling

rs2707765

iSNP

5

Degarelix

[186]

rs497844

BGLAP

Metabolism of bone

rs1800247

rSNP

1

Estramustine phosphate

[187]

EDN1

Vasoconstrictor

rs1800541

iSNP

6

Enzalutamide

[188]

rs2070699

CASP3

Apoptosis

rs4862396

gSNP

4

Abiraterone acetate

[149]

TRMT11

Methyltransferase

rs1268121

iSNP

6

Estramustine phosphate

[189]

rs6900796

COMT

Methyltransferase

rs4680

cSNP

22

Estramustine phosphate

[190]

KIF3C

miRNA target site

rs6728684

rSNP

2

Docetaxel + Thalidomide

[191]

IFI30

miRNA target site

rs1045747

rSNP

19

Docetaxel + Thalidomide

[191]

CDON

miRNA target site

rs3737336

rSNP

11

Docetaxel + Thalidomide

[192]

GABRA1

miRNA target site

rs998754

rSNP

5

Docetaxel + Thalidomide

[67]

PALLD

miRNA target site

rs1071738

rSNP

4

Abiraterone acetate

[191]

VEGFA

Angiogenesis

rs1570360

rSNP

6

Docetaxel, Celecoxib + Cyclophosphamide

[193]

SYT9

miRNA target site

rs4351800

rSNP

11

Abiraterone acetate

[194]

rs16901979,

gSNP

rs7931342