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Table 1 Brief information about non-metabolomics studies on urinary biomarkers for hepatocellular carcinoma

From: Urinary biomarkers for hepatocellular carcinoma: current knowledge for clinicians

Author/Year

Nations*

Samples

Platforms

Modeling

Validation

Categories

Biomarkers

Applications a

Results

Evidence from Serum/tissue

Serum AFP

Urinary proteins

Yeh/

1987

Taiwan, China

HCC, 31

Probably HCC, 15

Healthy, 21

RIA

  

TGF

TGF-α↑

Diagnosis

(Probably) HCC vs. Healthy

Cutoff at 10.5 μg/g creatinine

Sensitivity 71.7%

 

Cut-off at 400ng/ml

Sensitivity 58.7%

[TGF-α + AFP]

Sensitivity 93.5%

Tsai/

1997

Taiwan, China

HCC, 94

LC, 94

Healthy, 50

RIA

  

TGF

TGF-β1↑

Diagnosis

HCC vs. LC

AUROC 0.730

Cutoff at 50 μg/g creatinine

Sensitivity 53.1%

Specificity 98.9%

 

AUROC 0.730

Cut-off at 100ng/ml

Sensitivity 55.3%

Specificity 98.9%

OR 1.06 (1.02–1.10)

[TGF-β1 + AFP]

Sensitivity 84.0%

Specificity 97.8%

Independent risk factor

OR 1.08 (1.04–1.12)b

Prognosis

(Pathological features)

Correlation with

diffuse HCC (P = 0.001),

larger tumors (≥ 3 cm, P = 0.018),

more Child-Pugh C (P = 0.026).

Tsai/

1997

Taiwan, China

HCC, 94

LC, 94

RIA

  

TGF

TGF-β1↑

Prognosis

(Monitor)

After TACE TGF-β1↓ (P = 0.0001)

  

(OS)

TGF-β1↑ vs. TGF-β1 normal

OS↓ (P = 0.018)

Noie/

2001

Japan

Partial hepatectomy, 61

HCC, 40

RIA

  

UTI

UTI c

Other

Postoperative ΔuUTImax correlated with:

ICG clearance rate (P = 0.002)

Operation duration (P = 0.034)

Resection rate (P = 0.004)

  

Lin/

2004

Japan

HCC, 39

LC, 19

CH, 16

ELISA

  

UTI

UTI*

Other

HCC vs. CH, no significant difference

Child-Pugh C vs. Child-Pugh A/B

↓ (P < 0.05/0.01)

HCC vs. LC (P < 0.05)

LC vs. CH vs. NC↓ (P < 0.05)

Child-Pugh C vs. Child-Pugh A/B

↓ (P < 0.05/0.01)

 

Abdelsameea/

2020

Egypt

HCC, 40

LC, 40

CH, 40

Healthy, 40

ELISA

  

NGAL

NGAL↑

Diagnosis

HCC vs. LC

AUROC 0.95

Cutoff at 1255 ng/mL

Sensitivity 90%

Specificity 87.5%

Tissue: (Zhang/2012)

Expression of NGAL/NGALR↑ (P < 0.05) correlates with:

Vascular invasion (P = 0.03)

TNM stage (P = 0.004)

Recurrence (P < 0.001)

Shorter OS (P < 0.001)

AUROC 0.92

Cut-off at 39.6ng/ml

Sensitivity 85%

Specificity 100%

[NGAL + AFP]

AUROC 0.997

Sensitivity 95%

Specificity 100%

Suh/

2014

South Korea

HCC, 50

(Radiotherapy)

ELISA

  

MMP

MMP-2↑

Prognosis

(PFS)

MMP-2 ≥ median → worse PFS (P = 0.04)

MMP-2 or serum VEGF/plt ≥ median → worse PFS OR 2.12 (1.01–4.55)

  

Abdalla/

2012

Egypt

HCC, 32

HCV, 74

Normal, 12

LC-MS/MS,

RT-qPCR

  

Proteomics

RNA

DJ-1↑,

CAF-1↑,

HSP60↑

Diagnosis

Urinary RNA over-expression of

CAF-1

Sensitivity 66%

Specificity 90%

Accuracy 78%

HSP60

Sensitivity 83%

Specificity 42%

Accuracy 62%

[CAF-1 + HSP60]

Sensitivity 61%

Specificity 92%

Accuracy 77%

  

Huang/

2015

Taiwan, China

HCC, 44

Healthy, 44

NanoLC-MS/MS

  

Proteomics

S100A9↑,

GRN↑

Diagnosis

S100A9, GRN peptide quantification ratio (D/H) > 1.5

Co-up-regulation (r = 0.5732, P = 0.0066)

Tissue:

Gene: S100A9 amplified in 70% HCC, GRN amplified in 27% HCC, S100A9/GRN co-amplification (p = 0.001)

mRNA: S100A9/GRN co-expression (r = 0.3651, p < 0.0001)

Co-amplification → worse OS (p < 0.001)

 

Zhao/

2020

China

Training set

HCC, 36

LC, 29

CH, 14

Test set

HCC, 18

LC, 10

CH, 9

MRM set

HCC, 20

LC, 15

CH, 5

LC-MS/MS

RF

Cross-validation

External validation

MRM

Proteomics

HPX↑,

APOH↑,

APCS↑,

PLG↑,

GOT1↓,

GLR↓,

NCR3LG1↓

Diagnosis

MRM validation:

HCC vs. LC/CH

AUROC 0.95

Sensitivity 90.0%

Specificity 85.0%

 

HCC vs. LC/CH

AUROC 0.56

Zhan/

2020

China

Training set

HCC, 10

LC, 10

CH, 10

Healthy, 10

Validation set

HCC, 75

LC, 51

CH, 14

LC-ESI-MS/MS,

WB,

ELISA

 

External validation

Proteomics

AFP↑,

ORM1↑

Diagnosis

HCC vs. non-HCC

AFP

AUROC 0.795 (0.704–0.886)

Sensitivity 63.5%

Specificity 95.4%

ORM1

AUROC 0.705 (0.604–0.807)

[AFP + ORM1]

AUROC 0.864 (0.791–0.937)

Sensitivity 80.9%

Specificity 85.5%

 

HCC vs. non-HCC

AUROC 0.818 (0.734–0.903)

Cutoff at 334.3 ng/ml

Sensitivity 62.5%

Specificity 93.8%

Bannaga/2021

UK

Training set

HCC, 18

Non-HCC, 51

Validation set

HCC, 39

Non-HCC, 87

CE-MS/MS,

IHC

SVM

External validation

Proteomics

KLK6↑,

MMP-3↑,

MMP-13↑,

CTSD↑,

CTSE↑,

MEP1A↓,

CTSB↓

Diagnosis

Prognosis

(OS)

HCC-31 model (31 components)

AUROC 0.88 (0.81–0.93)

Sensitivity 79.5%

Specificity 85.1%

OS: OR 4.1 (1.7–9.8 P = 0.0005)

Tissue IHC:

KLK6↑

MEP1A↓

 

Urinary nucleic acids

Lin/

2011

Taiwan, China

HCC, 17

Healthy, 15

LNA clamp-mediated PCR

  

DNA

TP53 249T↑

Diagnosis

Sensitivity 52.9% (9/17)

Specificity 100% (15/15)

  

Jain/

2015

USA

Taiwan, China

HCC, 78

LC, 50

CH, 45

BS-qPCR,

qMSP

  

DNA

mRASSF1A↑

Diagnosis

mRASSF1A at P1

HCC vs. LC/CH

AUROC 0.705

HCC vs. CH

AUROC 0.831

HCC vs. LC

AUROC 0.595

Tissue: mRASSF1A at P1/E2/P2

HCC vs. LC/CH

P1 AUROC 0.90

At 90%sensitivity

Specificity

P1 72.9%

E1 38.6%

P2 27.1%

In AFP (-) HCC patients

81.8% (36/44) mRASSF1A at P1 (+)

Hann/

2017

USA

HCC, 10

Recurrent, 5

BS-qPCR

  

DNA

mRASSF1A↑,

mGSTP1↑,

TP53 249T↑

Prognosis

(Recurrence)

MRI-confirmed recurrent cases:

TP53 249T / mRASSF1A / mGSTP1 (+) (up to 9 months before MRI confirmation)

 

MRI-confirmed recurrent cases:

3/5 AFP (-)

Zhang/

2018

USA

Taiwan, China

HCC, 97

Non-HCC (CH, LC), 112

qPCR

  

DNA

TP53 249T↑, CTNNB1 32–37↑,

hTERT 124↑,

mRASSF1A↑

Diagnosis

[TP53 249T + hTERT 124 + mRASSF1A]

HCC vs. non-HCC

AUROC 0.607

Sensitivity 26.2%

Specificity 85.7%

Serum [TP53 249T + hTERT 124 + mRASSF1A]

HCC vs. non-HCC

AUROC 0.846

Sensitivity 76.2%

Specificity 85.7%

HCC vs. non-HCC

AUROC 0.799

Sensitivity 71.4%

Specificity 81.0%

[AFP + urine + serum]

AUROC 0.904

Sensitivity 90.5%

Specificity 81.0%

Wang/

2018

Taiwan,

China

HCC, 137

CH, 224

LC, 207

Not specified

LR,

CART,

FS (serum AFP→LR),

RF,

TS (LR→FS)

Cross-validation

DNA

mRASSF1A↑,

mGSTP1↑,

TP53 249T↑

Diagnosis

[serum AFP + ctDNA] (TS)

AUC 0.935 (0.930–0.940)

Sensitivity 87.9%

Specificity 90%

 

AUROC 0.88

Sensitivity 48.2%

Specificity 90%

Kim/

2022

USA

Taiwan, China

HCC, 186

LC, 144

CH, 279

qPCR

TS (AFP→LR)

Cross-validation

DNA

TP53 249↑,

mRASSF1A↑,

mGSTP1↑

Diagnosis

[ctDNA panel]

AUROC 0.715 (0.668–0.762)

[serum AFP + ctDNA] (TS)

AUROC 0.902 (0.871–0.933)

Sensitivity 90%

Specificity 79.6%

BCLC-A HCC

Sensitivity 90%

Specificity 77%

 

AUROC 0.8546 (0.8184–0.8908)

BCLC-A HCC

Sensitivity 90%

Specificity 40%

Abdalla/

2012

Egypt

HCC, 32

HCV-positive, 74

Normal, 12

MicroRNA array

RT-qPCR

  

RNA

miR-625↑,

miR-532↑,

miR-618↑,

miR-516-5p↓,

miR-650↓

Diagnosis

HCC vs. HCV-positive

[miR-618 + miR-650]

Sensitivity 58%

Specificity 75%

Accuracy: 69%

  

Åšwitlik/

2019

Poland

HCC, 65

Healthy, 29

MicroRNA array

RT-qPCR

Exploratory factor analysis

 

RNA

miR-618↑,

miR-532-3p↑,

miR-625↑,

miR-640↑,

miR-765↑

Diagnosis

[miR-532-3p + miR-765]

HCC vs. Healthy: Wilks χ [2]  = 0, P < 0.0001

Different miRNA profiles from tissue/serum/facet

 

Prognosis

(Pathological features)

[miR-532-3p + miR-765] clustering

Correlate with histological grade, clinical stage, classification for primary tumor, lymph node, and distant metastasis P < 0.005

Zhou/

2022

China

Early-HCC, 64

Advanced-HCC, 66

Healthy, 65

RT-qPCR

GEO2R

http://www.ncbi.nlm.nih.gov/geo/geo2r/)

 

RNA

miR-93-5p↑

Diagnosis

Advanced HCC vs. early HCC vs. Healthy

3.6-fold↑, 3.7-fold↑

Early HCC vs. Healthy

Sensitivity 87.5%

Specificity 97.4%

Tissue miR-93-5p

HCC vs. non-HCC

4.0-fold↑

Serum miR-93-5p

HCC vs. non-HCC

Advanced HCC vs. early HCC vs. Healthy

2.9-fold↑, 2.8-fold↑

Early HCC vs. Healthy

Sensitivity 85.9%

Specificity 95.4%

 

Prognosis

(Monitor)

1 month after hepatectomy

HCC vs. non-HCC

Not significant

(OS)

miR-93-5p↑ vs. miR-93-5p normal

OS↓ (Early HCC, P = 0.0031)

miR-93-5p↑ vs. miR-93-5p normal

OS↓ (Advanced HCC, P = 0.0014)

Urinary metabolites

Antoniello/

1998

Italy

HCC, 16

LC, 32

Healthy, 28

HPLC

  

Polyamines

PUT↑,

SPM↑,

SPD↑

Diagnosis

PUT (total, free, monoacetylated) ↑ (P < 0.001)

SPM (total, free) ↑ (P < 0.001)

SPD (total, free, monoacetylated, N1/N8 ratio) ↑ (P < 0.001)

  

Enjoji/

2004

Japan

HCC, 53

LC, 50

CH, 89

FL, 22

ELISA

  

Polyamines

DiAcSPM↑

Diagnosis

Cutoff at 325 nM/g creatinine

Sensitivity 65.5%

Specificity 76.0%

 

Cutoff at 20 ng/ml

Sensitivity 63.8%

Prognosis

(Monitor)

Treated HCC, DiAcSPM↓ (P = 0.0431)

Untreated HCC, DiAcSPM↑

Liu/

2013

China

Hepatic cancer, 20

Healthy, 20

UHPLC-MS/MS

  

Polyamines

NSPD↑,

SPM↑,

SPD↑

Diagnosis

Cancer vs. Normal P < 0.05↑

Serum PUT, SPD↑;

L-ornithine, γ-aminobutyric acid↓

 

Yu/

2015

Animal

(Rats)

HCC model, 40

Treated, 20

Normal, 20

UHPLC-MS/MS

  

Polyamines

NSPD↑,

NSPM↑,

DiAcSPD↑,

DiAcSPM↑

Diagnosis

HCC vs. Normal P < 0.05↑

Tissue PUT↑

Serum NSPD↑

Serum/Tissue/Urine NSPD↑

 

Prognosis

(Monitor)

Treated vs. HCC

P < 0.05↓

Dusheiko/

1982

South Africa

HCC, 31

Other malignancies, 16

Liver dysfunction, 16

Healthy, 25

RIA

  

Nucleotides

cGMP↑

Diagnosis

HCC, liver dysfunction, other malignancies vs. Healthy ↑ (P < 0.0005)

Cutoff at 0.95 nmol/100 mL GF

Sensitivity 80% in HCC, 68% in other malignancies, 75% in liver dysfunction

cGMP↑ in HCC and liver dysfunction

 

Sakai/

1990

Japan

Mixed, including

Hepatic cancer, 41

LC, 21

Biochemistry

  

L-Fucose

L-Fucose↑

Diagnosis

Cutoff at 215 μmol/g creatinine

Hepatic cancer: Sensitivity 90.5% (19/21)

LC: Sensitivity 85.4% (35/41)

Gastric cancer, lung cancer, and gallbladder cancer ↑

  

Bannaga/

2021

UK

HCC, 31

Prostate cancer, 62

Bladder cancer, 29

Non-cancer, 18

SPME

PCA

RBFN

50% validation set

VOCs

Not specified

Diagnosis

In AFP ≥ 10 kU/L

Sensitivity 83%

AUC 0.83 (0.73–0.93)

In AFP < 10 kU/L

Sensitivity 68%

AUC 0.68 (0.54–0.81)

 

Serum AFP alone (cutoff 10 ku/L)

Sensitivity 54.8%

Bannaga/

2021

UK

HCC, 20

Healthy/NAFLD, 38

GC-IMS

GC-TOF-MS/MS

RF

LR

 

VOCs

2-Butanone↑,

6 other VOCs↓

Diagnosis

Significantly different in HCC vs. Non-HCC

GC-IMS model (factors not specified):

HCC vs. LC

AUROC 0.97 (0.91–1.00)

Sensitivity 0.43 (0.13–0.75)

Specificity 0.95 (0.86–1.00)

  

Etiology/carcinogenesis-related biomarkers

Ross/

1992

China

HCC, 22

Healthy, 140

HPLC

  

Aflatoxin-related

AFP1↑,

AFB1-N [7]-Gua↑,

AFM1↑,

AFB1↑

Independent risk factor

Any of the compounds

RR 3.8 (1.2–12.2)

  

Wang/

1996

Taiwan, China

HCC, 56

Healthy, 220

ELISA

  

Aflatoxin-related

Aflatoxin metabolites (mainly AFB1, cross reactivity with AFB2, AFM1, AFG1, AFP1 etc.)↑

Independent risk factor

1st half OR 3.8 (1.1–12.8)

1st tertile OR 7.2 (1.5–34.3)

Serum aflatoxin-albumin adducts↑

 

Hatch/

1993

Taiwan, China

Residents, 250

ELISA

  

Aflatoxin-related

Aflatoxin metabolites (mainly AFB1, cross reactivity with AFB2, AFM1, AFG1, AFP1 etc.)↑

Independent risk factor

Individual biomarker level & Area HCC mortality: positive correlation P < 0.05

  

Nair/

2004

Thailand

AC, unknown

CH, unknown

LC, unknown

HCC, unknown

Immuno-enriched HPLC-

fluorescence

  

Oxidative stress-related

ε-dA↑

Diagnosis

[CH, LC, HCC] vs. [AC] 20-90-fold↑

  

Wu/

2008

Taiwan, China

HCC, 74

Healthy, 290

ELISA

  

Oxidative stress-related & Aflatoxin-related

15-F2t-IsoP↑,

8-oxodG↑,

AFB1↑

Independent risk factor

AFB1 correlates with 8-oxodG and 15-F2t-IsoP (P < 0.0001)

15-F2t-IsoP:

1st half OR 2.53 (1.30–4.93)

1st tertile OR 6.27 (2.17–18.13)

2nd tertile OR 3.87 (1.32–11.38)

  

Ma/

2018

China

HCC, 363

Healthy, 725

ELISA

  

Oxidative stress-related

15-F2t-IsoP↑

Independent risk factor

4th quartile vs. 1st quartile

Male OR 8.84 (2.74–28.60)

Female OR 1.75 (0.70–4.42)

  

Yuan/

2019

China

HCC, 347

Healthy, 691

LC-ESI-MS/MS

  

Oxidative stress-related

8-epi-PGF2α↑

Independent risk factor

4th quartile vs. 1st quartile

OR 5.29 (1.92–14.54)

  
  1. a Only include the application of urinary biomarkers. b Ranges in parentheses represent the 95% confidence interval (95% CI). c Parameters that cannot be classified as up- or downregulated in hepatocellular carcinoma/liver cancer. * Nations refer to the countries/regions of the tested patients, studies in animals are shown as the species of aexperimented animals
  2. Samples: HCC, hepatocellular carcinoma. LC, liver cirrhosis. CH, chronic hepatitis. MRM, multiple reaction monitoring. HCV, hepatitis C virus. FL, fatty liver. Platforms: RIA, radioimmunoassay. ELISA, enzyme-linked immunosorbent assay. LC-MS/MS, liquid chromatography-tandem mass spectrometry. LC-ESI-MS/MS, liquid chromatography-electrospray ionization-tandem mass spectrometry. WB, western blot. RT-qPCR, quantitative reverse transcription PCR. CE-MS/MS, capillary electrophoresis mass spectrometry. IHC, immunohistochemistry. LNA, locked nucleic acid. BS-qPCR, bisulfite quantitative PCR. qMSP, quantitative methylation-specific PCR. UHPLC-MS, ultra-high-performance liquid chromatography-tandem mass spectrometry. HPLC, high-performance liquid chromatography. GC-TOF-MS/MS, gas chromatography–time-of-flight mass spectrometry. GC-IMS, gas chromatography–ion mobility spectrometry. SPME, solid-phase microextraction. Modeling and validation methods: RF, random forest. SVM, support vector machine. LR, logistic regression. CART, classification and regression trees. FS, fixed sequential. TS, two-step. Categories and biomarkers: TGF, transforming growth factor. UTI, urinary trypsin inhibitor. NGAL(R), neutrophil gelatinase-associated lipocalin (receptor). MMP, matrix metalloproteinase. HPX, hemopexin. APOH, apolipoprotein H. APCS, amyloid P component, serum. PLG, plasminogen. GOT1, glutamic oxaloacetic transaminase 1. GLRX, glutaredoxin. NCR3LG1, natural killer cell cytotoxicity receptor 3 ligand 1. CAF-1, chromatin assembly factor-1. HSP60, heat shock protein 60. KLK6, kallikrein-6. CTS, cathepsins. MEP1A, meprin A subunit α. PUT, putrescine. SPM, spermine. SPD, spermidine. NSPM, N-acetylspermine. NSPD, N-acetylspermidine. DiAcSPM, N [1], N [12]-diacetylspermine. DiAcSPD, N [1], N [8]-diacetylspermidine. AF, aflatoxin. Gua, guanine. ε-dA, etheno-deoxyadenosine. 8-epi-PGF2α, 8-epi-Prostaglandin F2α. 15-F2t-IsoP, 15-F2t-isoprostane. 8-oxodG, 8-oxo-7,8-dihydro-2’-deoxyguanosine. Results: AFP, alpha-fetoprotein. AUROC, area under the receiver operating characteristic. TACE, transarterial chemoembolization. ICG, indocyanine green. CRP, C reactive protein. OS, overall survival. PFS, progression-free survival. OR, odds ratio. BCLC, Barcelona Clinic Liver Cancer. GF, glomerular filtration