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Table 2 qRT-PCR primers used in each study and lncRNA BBOX1-AS1 variants detected in tissue samples

From: A review on the role of gamma-butyrobetaine hydroxylase 1 antisense RNA 1 in the carcinogenesis and tumor progression

Tumor type

qRT-PCR primers

LncRNA BBOX1-AS1 variants

Ref.

Pituitary adenoma

[34]

Oral squamous cell carcinoma

Forward: 5′-TGTGTGTTTCCTGAGGCCTC-3′

Reverse: 5′-CGCCTCTCTTGGAACACCTT-3′

ENST00000526061.5

[35]

Nasopharyngeal carcinoma

Forward: 5ʹ-TGTGTGTTTCCTGAGGCCTC-3′

Reverse: 5ʹ-CGCCTCTCTTGGAACACCTT-3′

ENST00000526061.5

[37]

Nasopharyngeal carcinoma

Forward: 5′-TGCAACTCCAAACCTAACGC-3′

Reverse: 5′-GAGTGACTGGGGTCAGGGTA-3′

ENST00000525302.5

[36]

Non-small cell lung cancer

[40]

Non-small cell lung cancer

Forward: 5′-CAGACTCCTGCTTTGCTCTT-3′

Reverse: 5′-GGAAGCATCTTCTCAGCTTCT-3′

ENST00000530430.1

[39]

Lung squamous cell carcinoma

Forward: 5′‑GATGGGCACATTTGGAAGTT‑3′

Reverse: 5′‑CAGCGTTAGGTTTGGAGTTG‑3′

ENST00000525302.5

ENST00000530430.1

[38]

Esophageal carcinoma

Forward: 5′-CCG CTG ACA GGT CTA GGA GT-3′

Reverse: 5′-AGT GAC TGG GGT CAG GGT AA-3′

ENST00000525302.5

[45]

Esophageal squamous cell carcinoma

Forward: 5′- CAGACTCCTGCTTTGCTCTT-3′

Reverse: 5′- GGAAGCATCTTCTCAGCTTCT-3′

ENST00000526061.5

ENST00000525302.5

ENST00000530430.1

[44]

Esophageal squamous cell carcinoma

Forward: 5′- CGAGACTCCGTGGGCGTAGG-3′

Reverse: 5′- CGGGCGGCACCTGGAAAATC-3′

ENST00000531363.1

ENST00000530430.1

[43]

Esophageal squamous cell carcinoma

[42]

Esophageal carcinoma

Forward: 5′-CCGCTGACAGGTCTAGGAGT-3′

Reverse: 5′-AGTGACTGGGGTCAGGGTAA-3′

ENST00000525302.5

[41]

Gastric cancer

Forward: 5′-TGCAACTCCAAACCTAACG-3′

Reverse: 5′-GAGTGACTGGGGTCAGGGTA-3′

ENST00000525302.5

[48]

Hepatocellular carcinoma

Forward: 5′-CCTGAATACCAAAGAGGGCCG-3′

Reverse: 5′-TGAAGCCTCTCTCTGCTAGGT-3′

ENST00000525302.5, ENST00000530430.1, ENST00000531363.1, ENST00000526061.5, ENST00000670273.1

[46]

Hepatocellular carcinoma

Forward: 5′-CCTGAATACCAAAGAGGGCCG-3′

Reverse: 5′-TGAAGCCTCTCTCTGCTAGGT-3′

ENST00000525302.5, ENST00000530430.1, ENST00000531363.1, ENST00000526061.5, ENST00000670273.1

[47]

Ovarian cancer

[51]

Cervical cancer

[53]

Cervical cancer

[52]

  1. qRT-PCR quantitative reverse transcription polymerase chain reaction
  2. “–”: indicates missing or not applicable data