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Table 3 Metabolism-relevant and non-invasive biomarkers in IBD and CRC

From: Epigenetic and metabolic reprogramming in inflammatory bowel diseases: diagnostic and prognostic biomarkers in colorectal cancer

Biomarkers

Study

Result

Diagnostic/prognostic

References

GLUT-1

20 CRC patients

GLUT-1 overexpression associate to Tumor Size, and Depth of Invasion

Prognostic

[136]

HK1

Colonic tissue

Inflammatory role of HK-1

Can be used as a prognostic biomarker

[137]

Linoleic acid and 12-hydroxy-8,10-octadecadienoic acid

gut microbiome and the metabolic profiles were studied by using UHPLC-Q-TOF–MS/MS metabolomics and 16S rDNA sequencing technology in rats

Intestinal microbiota and host metabolism are involved in the pathophysiological process of IBD transition to CRC

Biomarkers for predicting UC transition to CRC

[138]

Serum M2-PK

Molecular epidemiology study on the serum of CRC patients

Serum M2-PK is a potential screening test for CRC

Diagnostic/early detection of CRC

[139]

Fecal tumor M2-PK

Case–control

Sensitive biomarker for pre-selection for colonoscopy

Diagnostic

[140]

Thymidine, Fumarate, Hippurate, cis-Aconitate, Pyridoxic acid, Cinnamic acid, Homogentisic acid, Indoleacetate, Trigonelline, Creatinine, Creatine, Uracil, Urea

Proton 1H-NMR study of CRC patients

The findings support the value of NMR-based urinary metabolomics fingerprinting for CRC early diagnosis

Diagnosis

[141]

Lipogenic enzymes, glycerophospholipids, sphingolipids, triacylglycerol

Lipidomic analysis in a cohort

CRC lipidome showed a TG-species profile

Prognostic

[142]

Six metabolic genes (NAT2, XDH, GPX3, AKR1C4, SPHK1, and ADCY5) expression

Bioinformatics analysis of Cancer Genome Atlas database

Several metabolic genes play role in the survival and clinical stage of CRC

Diagnostic/Prognostic

[143]

DMA, Arginine

CRC patients undergoing surgery

L-arginine/NO pathway metabolites can be used for screening

Prognostic

[144]

Hydroxylated, polyunsaturated ultra-long-chain fatty acids

Case–control study using FTICR-MS

These metabolites’ decrease CRC

Diagnostic

[145]

DPEP1

A meta-analysis of microarray and SAGE

DPEP1 can be used for screening of early neoplastic lesions

Prognostic

[146]

D-2-hydroxyglutarate

Mouse model

D-2-hydroxyglutarate decrease in progressive UC

Prognostic

[147]

Haemoglobin FIT

Case–control

Haemoglobin quantification in CM is a noticeable marker to detect CRC

Diagnosis

[148]

Fecal Calprotectin, and Stool Lactoferrin

Meta-analysis

FC, and SL are valuable biomarkers for defining the disease activity in IBD

Prognostic

[149]

MMP-9

A pilot study on faecal MMP-9

Fecal MMP-9 might be used as a non-invasive-biomarker

Prognostic

[150]

  1. M2-PK: M2-pyruvate kinase, UHPLC-Q-TOF–MS/MS: Ultra-high-performance liquid chromatography combined with electrospray ionization quadrupole time-of-flight tandem mass spectrometry, H-NMR: Nuclear magnetic resonance spectroscopy, DMA: Dimethylarginines and dimethylamine, FTICR-MS : Fourier transform ion cyclotron resonance mass spectrometry, DPEP1: Dipeptidase 1, SAGE: Serial Analysis of Gene Expression, FIT: Fecal immunochemical, CM: Colorectal mucus, FC: Fecal calprotectin, SL: Stool lactoferrin, MMP-9: Matrix-metalloproteinase-9